RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SNRPEP62304 92 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 TMEM88Q6PEY1 159 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 POMZP3Q6PJE2 187 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 GCNT7Q6ZNI0 430 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 SLC34A3Q8N130 599 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 CARFQ8N187 725 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 LIX1Q8N485 282 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 NANOGP1Q8N7R0 232 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 IPMKQ8NFU5 416 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 CREB3L4Q8TEY5 395 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ISG20Q96AZ6 181 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 MTERF3Q96E29 417 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 CNPPD1Q9BV87 410 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 SNRNP25Q9BV90 132 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 LRRC3Q9BY71 257 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ACTR8Q9H981 624 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 AMBNQ9NP70 447 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 SNTG1Q9NSN8 517 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 C14orf105Q9NVL8 296 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 VNN3Q9NY84 501 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 PSORS1C1Q9UIG5 152 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ST3GAL5Q9UNP4 418 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 PTGDR2Q9Y5Y4 395 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 MIA3Q5JRA6 1907 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 IQCMA0A1B0GVH7 501 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ANKDD1BA6NHY2 528 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ADAM12O43184 909 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 RBBP9O75884 186 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 MT-CYBP00156 380 aaPredicted RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 OR56A5P0C7T3 313 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 GGT1P19440 569 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 CYP2B6P20813 491 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 VAMP1P23763 118 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 DNASE1P24855 282 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ATP5A1P25705 553 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 APEX1P27695 318 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 HOXA9P31269 272 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 DAPP51397 102 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 RORCP51449 518 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 VSX2P58304 361 aaPredicted RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 EMX2Q04743 252 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 DOC2BQ14184 412 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF460Q14592 562 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 EXOC3L2Q2M3D2 409 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 RAB6CQ53S08 254 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 LRRC66Q68CR7 880 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 C3orf33Q6P1S2 294 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ADHFE1Q8IWW8 467 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 GPR65Q8IYL9 337 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 TMEM145Q8NBT3 493 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 C19orf18Q8NEA5 215 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 CREB3L1Q96BA8 519 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 COL21A1Q96P44 957 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 DMRTA2Q96SC8 542 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 MYOCQ99972 504 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 MRPL57Q9BQC6 102 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 H2AFJQ9BTM1 129 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 MCOLN1Q9GZU1 580 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 RAB6CQ9H0N0 254 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 RHBGQ9H310 441 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 HCN2Q9UL51 889 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF451Q9Y4E5 1061 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 UBFD1O14562 309 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 PTGESO14684 152 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 FFAR3O14843 346 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 GPR42O15529 346 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 PRG2P13727 222 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 STOMP27105 288 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 CASP2P42575 452 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 VEGFCP49767 419 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 KIAA1024LP59773 190 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 DNAJB13P59910 316 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 STX4Q12846 297 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 CRHR2Q13324 411 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 TSTQ16762 297 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 UPP1Q16831 310 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 SPANXN3Q5MJ09 141 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 HECTD3Q5T447 861 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ESRP1Q6NXG1 681 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 C3P1Q6ZMU1 363 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 NUDT18Q6ZVK8 323 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 DNAJC5GQ8N7S2 189 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 TTC29Q8NA56 475 aaPredicted RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 COQ8AQ8NI60 647 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 ART5Q96L15 291 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 TEX37Q96LM6 180 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 PPP3R2Q96LZ3 170 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 SFXN2Q96NB2 322 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 CSPG4P5Q96PW8 444 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 RAD9AQ99638 391 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 DDX31Q9H8H2 851 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 AGO3Q9H9G7 860 aaKnown RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 B3GAT2Q9NPZ5 323 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 SDR39U1Q9NRG7 319 aaPredicted RBP7.17□□□□□ -1.26
CDKL5-201ENST00000379989 KRT84Q9NSB2 600 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 NDUFAF4Q9P032 175 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 SEC14L3Q9UDX4 400 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 A0A0A0MRY4 1105 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 A0A1W2PQL4 384 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 A0A1W2PRQ8 180 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms