RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 STMN3Q9NZ72 180 aa16.4■□□□□ 0.22
TRIM27-201ENST00000377194 RAPGEFL1Q9UHV5 662 aa16.4■□□□□ 0.22
TRIM27-201ENST00000377194 MRPS23Q9Y3D9 190 aaKnown RBP16.4■□□□□ 0.22
TRIM27-201ENST00000377194 XIRP2A4UGR9 3374 aa16.39■□□□□ 0.22
TRIM27-201ENST00000377194 MEIOCA2RUB1 952 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 CDK2AP1O14519 115 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 PRMT3O60678 531 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 EPN2O95208 641 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
TRIM27-201ENST00000377194 ANXA4P09525 319 aaPredicted RBP16.39■□□□□ 0.21
TRIM27-201ENST00000377194 OR3A3P47888 321 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 RFX2P48378 723 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 NUDT6P53370 316 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 RPS13P62277 151 aaKnown RBP16.39■□□□□ 0.21
TRIM27-201ENST00000377194 RPP38P78345 283 aaKnown RBP16.39■□□□□ 0.21
TRIM27-201ENST00000377194 TSTA3Q13630 321 aaPredicted RBP16.39■□□□□ 0.21
TRIM27-201ENST00000377194 PROX2Q3B8N5 592 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 SLCO4C1Q6ZQN7 724 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 TMPRSS11BQ86T26 416 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 ENTHD1Q8IYW4 607 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 ATG16L2Q8NAA4 619 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 PIK3R3Q92569 461 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 BADQ92934 168 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 SNAPC3Q92966 411 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 GDF15Q99988 308 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 DUSP26Q9BV47 211 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 NXF2Q9GZY0 626 aaKnown RBP16.39■□□□□ 0.21
TRIM27-201ENST00000377194 KIF17Q9P2E2 1029 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 EXO1Q9UQ84 846 aaKnown RBP16.39■□□□□ 0.21
TRIM27-201ENST00000377194 SCAMP2O15127 329 aaKnown RBP16.39■□□□□ 0.21
TRIM27-201ENST00000377194 VIPP01282 170 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 GBAP04062 536 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 NPPBP16860 134 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 KDELR2P33947 212 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 VLDLRP98155 873 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 ZNF33BQ06732 778 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 MADCAM1Q13477 382 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 ARMC4Q5T2S8 1044 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 GRPEL2Q8TAA5 225 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 CHTF18Q8WVB6 975 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 ARRDC3Q96B67 414 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 DHRS9Q9BPW9 319 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 ROGDIQ9GZN7 287 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 TPT1P8Q9HAU6 139 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 PRM3Q9NNZ6 103 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 IL1RAPQ9NPH3 570 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 FAM120CQ9NX05 1096 aaKnown RBP16.39■□□□□ 0.21
TRIM27-201ENST00000377194 COQ3Q9NZJ6 369 aa16.39■□□□□ 0.21
TRIM27-201ENST00000377194 ARHGAP33O14559 1287 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 MRPS14O60783 128 aaKnown RBP16.38■□□□□ 0.21
TRIM27-201ENST00000377194 TMCC2O75069 709 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 TBPL1P62380 186 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 PCDH1Q08174 1060 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 PRR23CQ6ZRP0 262 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 TRAPPC5Q8IUR0 188 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 ZNF547Q8IVP9 402 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 CYP4Z2PQ8N1L4 340 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 UBE2J2Q8N2K1 259 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 C12orf76Q8N812 135 aaPredicted RBP16.38■□□□□ 0.21
TRIM27-201ENST00000377194 BRF2Q9HAW0 419 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 ZDHHC4Q9NPG8 344 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 SIRT5Q9NXA8 310 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 VPS4AQ9UN37 437 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 SAMD4AQ9UPU9 718 aaKnown RBP16.38■□□□□ 0.21
TRIM27-201ENST00000377194 KLHL20Q9Y2M5 609 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 PEX16Q9Y5Y5 336 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 LYVE1Q9Y5Y7 322 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 KCNE2Q9Y6J6 123 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 REV3LO60673 3130 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 SLC9A3R1O14745 358 aaPredicted RBP16.38■□□□□ 0.21
TRIM27-201ENST00000377194 RGS5O15539 181 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 RPLP0P05388 317 aaKnown RBP16.38■□□□□ 0.21
TRIM27-201ENST00000377194 IDSP22304 550 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 DNAJA1P31689 397 aaKnown RBP16.38■□□□□ 0.21
TRIM27-201ENST00000377194 SLC19A1P41440 591 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 CRYBA2P53672 197 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 ST8SIA6P61647 398 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 SNRPD2P62316 118 aaKnown RBP16.38■□□□□ 0.21
TRIM27-201ENST00000377194 DUSP7Q16829 419 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 SDE2Q6IQ49 451 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 KLHDC8AQ8IYD2 350 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 NRSN1Q8IZ57 195 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 MAL2Q969L2 176 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 FOPNLQ96NB1 174 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 MAT2BQ9NZL9 334 aa16.38■□□□□ 0.21
TRIM27-201ENST00000377194 PCYT1BQ9Y5K3 369 aaPredicted RBP16.38■□□□□ 0.21
TRIM27-201ENST00000377194 FAM25AB3EWG3 89 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 FAM25CB3EWG5 89 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 FAM25GB3EWG6 89 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 MMP20O60882 483 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 SCO1O75880 301 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 YES1P07947 543 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 HNRNPA1P09651 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
TRIM27-201ENST00000377194 C21orf58P58505 322 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 C19orf57Q0VDD7 668 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 NPRL3Q12980 569 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 GAB1Q13480 694 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 CDONQ4KMG0 1287 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 TMEM240Q5SV17 173 aa16.37■□□□□ 0.21
TRIM27-201ENST00000377194 C9orf64Q5T6V5 341 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms