RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 TRIM42Q8IWZ5 723 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 C1orf52Q8N6N3 182 aaKnown RBP18.71■□□□□ 0.59
DDR1-228ENST00000376575 ZNF781Q8N8C0 355 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 OR11G2Q8NGC1 345 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 OR2T11Q8NH01 316 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 TWIST2Q8WVJ9 160 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 TTC9Q92623 222 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 ILKAPQ9H0C8 392 aaPredicted RBP18.71■□□□□ 0.59
DDR1-228ENST00000376575 PRM3Q9NNZ6 103 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 PRDM9Q9NQV7 894 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 THAP1Q9NVV9 213 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 PHF11Q9UIL8 331 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 PTGDR2Q9Y5Y4 395 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 KCNMB2Q9Y691 235 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 NBEAQ8NFP9 2946 aa18.71■□□□□ 0.59
DDR1-228ENST00000376575 A0A1W2PR48 441 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 SLC28A1O00337 649 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 PRMT3O60678 531 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 B4GALT2O60909 372 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 CHEK2O96017 543 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 GBAP04062 536 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 C8orf89P0DMQ9 161 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 TRA2BP62995 288 aaKnown RBP18.7■□□□□ 0.58
DDR1-228ENST00000376575 OCRLQ01968 901 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 TNFRSF17Q02223 184 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 TBR1Q16650 682 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 DEFB109BQ30KR1 87 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 KIRREL3Q8IZU9 778 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 FCRL1Q96LA6 429 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 CCT7Q99832 543 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 MCM8Q9UJA3 840 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 FBXW2Q9UKT8 454 aa18.7■□□□□ 0.58
DDR1-228ENST00000376575 TCRBV16S1A1N1A0A5B0 115 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 TGFBR3LH3BV60 316 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 CTNSO60931 367 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 NEFHP12036 1026 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 COX6A1P12074 109 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 RPL14P50914 215 aaKnown RBP18.69■□□□□ 0.58
DDR1-228ENST00000376575 CCNYL2Q5T2Q4 361 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 ATG16L1Q676U5 607 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 CYP20A1Q6UW02 462 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 ANKRD37Q7Z713 158 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 TMEM102Q8N9M5 508 aaPredicted RBP18.69■□□□□ 0.58
DDR1-228ENST00000376575 FAM47BQ8NA70 645 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 FAM76AQ8TAV0 307 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 ZNF75CPQ92670 426 aaPredicted RBP18.69■□□□□ 0.58
DDR1-228ENST00000376575 TSLPQ969D9 159 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 TM4SF18Q96CE8 201 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 WDR77Q9BQA1 342 aaPredicted RBP18.69■□□□□ 0.58
DDR1-228ENST00000376575 ZNF700Q9H0M5 742 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 MED4Q9NPJ6 270 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 NECTIN3Q9NQS3 549 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 MRPS33Q9Y291 106 aaKnown RBP18.69■□□□□ 0.58
DDR1-228ENST00000376575 MAN2B2Q9Y2E5 1009 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 FIS1Q9Y3D6 152 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 SPACA6W5XKT8 324 aa18.69■□□□□ 0.58
DDR1-228ENST00000376575 IGHV1-45A0A0A0MS14 117 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 CLDN4O14493 209 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 DYNC1I1O14576 645 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 PIP5K1BO14986 540 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 LSM1O15116 133 aaKnown RBP18.68■□□□□ 0.58
DDR1-228ENST00000376575 RGS14O43566 566 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 LINC00032P0C843 101 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 ACPPP15309 386 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 NR1D1P20393 614 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 MAOAP21397 527 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 CPN2P22792 545 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 SOX8P57073 446 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 IGLV3-21P80748 117 aaPredicted RBP18.68■□□□□ 0.58
DDR1-228ENST00000376575 RHDQ02161 417 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 PCOLCEQ15113 449 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 NSDHLQ15738 373 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 LINC00303Q3SY05 128 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 DCAF10Q5QP82 559 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 C18orf63Q68DL7 685 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 BORAQ6PGQ7 559 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 LANCL3Q6ZV70 420 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.68■□□□□ 0.58
DDR1-228ENST00000376575 AGR3Q8TD06 166 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 METTL21AQ8WXB1 218 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 ANKRD9Q96BM1 317 aaPredicted RBP18.68■□□□□ 0.58
DDR1-228ENST00000376575 C8orf44Q96CB5 159 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 C3orf30Q96M34 536 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 PTCHD1Q96NR3 888 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 PRTFDC1Q9NRG1 225 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 TEX10Q9NXF1 929 aaPredicted RBP18.68■□□□□ 0.58
DDR1-228ENST00000376575 FBXL4Q9UKA2 621 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 DOCK10Q96BY6 2186 aa18.68■□□□□ 0.58
DDR1-228ENST00000376575 SYNDIG1LA6NDD5 238 aa18.67■□□□□ 0.58
DDR1-228ENST00000376575 PEX12O00623 359 aa18.67■□□□□ 0.58
DDR1-228ENST00000376575 AIFM1O95831 613 aa18.67■□□□□ 0.58
DDR1-228ENST00000376575 HPP00738 406 aa18.67■□□□□ 0.58
DDR1-228ENST00000376575 JUNP05412 331 aaKnown RBP18.67■□□□□ 0.58
DDR1-228ENST00000376575 TIA1P31483 386 aaKnown RBP eCLIP18.67■□□□□ 0.58
DDR1-228ENST00000376575 BUD31P41223 144 aaPredicted RBP18.67■□□□□ 0.58
DDR1-228ENST00000376575 MAPK12P53778 367 aa18.67■□□□□ 0.58
DDR1-228ENST00000376575 ACSM2AQ08AH3 577 aa18.67■□□□□ 0.58
DDR1-228ENST00000376575 IMPG1Q17R60 797 aa18.67■□□□□ 0.58
DDR1-228ENST00000376575 MFSD4BQ5TF39 518 aa18.67■□□□□ 0.58
DDR1-228ENST00000376575 ACSM2BQ68CK6 577 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms