RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 FAF1Q9UNN5 650 aaPredicted RBP11.94□□□□□ -0.5
CLCN6-206ENST00000376496 U3KQV3 271 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 A0A1B0GVT2 93 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 LDLRP01130 860 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 UMPSP11172 480 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 ZNF23P17027 643 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 TNFRSF1BP20333 461 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 RPS15AP62244 130 aaKnown RBP11.94□□□□□ -0.5
CLCN6-206ENST00000376496 BIRC2Q13490 618 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 CPZQ66K79 652 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 IRGCQ6NXR0 463 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 FAM92BQ6ZTR7 304 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 CAMKK1Q8N5S9 505 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 ANKFN1Q8N957 763 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 PAPD5Q8NDF8 572 aaKnown RBP11.94□□□□□ -0.5
CLCN6-206ENST00000376496 NFKBIDQ8NI38 313 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 UTP15Q8TED0 518 aaKnown RBP11.94□□□□□ -0.5
CLCN6-206ENST00000376496 MTERF3Q96E29 417 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 CENPNQ96H22 339 aaPredicted RBP11.94□□□□□ -0.5
CLCN6-206ENST00000376496 TPD52L3Q96J77 140 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 SPACA7Q96KW9 195 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 KLHL3Q9UH77 587 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 PILRAQ9UKJ1 303 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 MAPRE3Q9UPY8 281 aa11.94□□□□□ -0.5
CLCN6-206ENST00000376496 OR5K3A6NET4 321 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 hCG_2039718K7EN88 272 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 EI24O14681 340 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 GCM2O75603 506 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 CAPNS1P04632 268 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 RAP2AP10114 183 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 RPL3P39023 403 aaKnown RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 VAC14Q08AM6 782 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 BNIP3Q12983 259 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 LAPTM4AQ15012 233 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 NKAIN2Q5VXU1 208 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 ZC3H7AQ8IWR0 971 aaKnown RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 OR4N5Q8IXE1 308 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 CCDC116Q8IYX3 515 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 GOT1L1Q8NHS2 421 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 SARGQ9BW04 601 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 UBAP1Q9NZ09 502 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 ANKMY1Q9P2S6 941 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 PADI4Q9UM07 663 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 OR5K4A6NMS3 321 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 PLOD2O00469 737 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 ACOX3O15254 700 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 CLOCKO15516 846 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 PCSK2P16519 638 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 KDELR2P33947 212 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 NUDT1P36639 197 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 PCBP4P57723 403 aaKnown RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 VSX2P58304 361 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 NXPH1P58417 271 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 ID2Q02363 134 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 FOXD4Q12950 439 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 TP53BP2Q13625 1128 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 ELOCQ15369 112 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 ATP6AP1Q15904 470 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 SPDYE7PQ495Y7 208 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 AVL9Q8NBF6 648 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 OR5T3Q8NGG3 340 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 RNF31Q96EP0 1072 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 YIPF4Q9BSR8 244 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 GLIPR2Q9H4G4 154 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 SIRT3Q9NTG7 399 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 CCDC88CQ9P219 2028 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 SLC9B1P1A6NJY1 282 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 AGRPO00253 132 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 UPK1AO00322 258 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 AQP9O43315 295 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 TNFSF14O43557 240 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 NOBOXO60393 691 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 SLC35G6P0C7Q6 338 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 PRKAG1P54619 331 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 STXBP1P61764 594 aaKnown RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 MRM1Q6IN84 353 aaKnown RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 OOSP2Q86WS3 158 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 UBALD2Q8IYN6 164 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 GOLM1Q8NBJ4 401 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 BAHD1Q8TBE0 780 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 TMBIM1Q969X1 311 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 CNRIP1Q96F85 164 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-206ENST00000376496 CSF3RQ99062 836 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 ZFYVE21Q9BQ24 234 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 ADAM29Q9UKF5 820 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 ABCG2Q9UNQ0 655 aa11.93□□□□□ -0.5
CLCN6-206ENST00000376496 A0A0J9YY10 115 aa11.92□□□□□ -0.5
CLCN6-206ENST00000376496 TNFRSF21O75509 655 aa11.92□□□□□ -0.5
CLCN6-206ENST00000376496 CST1P01037 141 aa11.92□□□□□ -0.5
CLCN6-206ENST00000376496 RETP07949 1114 aa11.92□□□□□ -0.5
CLCN6-206ENST00000376496 CDH3P22223 829 aa11.92□□□□□ -0.5
CLCN6-206ENST00000376496 NCBP2P52298 156 aaKnown RBP eCLIP11.92□□□□□ -0.52e-8■■□□□ 13.6
CLCN6-206ENST00000376496 GFERP55789 205 aa11.92□□□□□ -0.5
CLCN6-206ENST00000376496 SIM1P81133 766 aaPredicted RBP11.92□□□□□ -0.5
CLCN6-206ENST00000376496 RGS1Q08116 209 aa11.92□□□□□ -0.5
CLCN6-206ENST00000376496 MED21Q13503 144 aa11.92□□□□□ -0.5
CLCN6-206ENST00000376496 RUNX2Q13950 521 aa11.92□□□□□ -0.5
CLCN6-206ENST00000376496 RPS26P11Q5JNZ5 115 aaPredicted RBP11.92□□□□□ -0.5
CLCN6-206ENST00000376496 TMTC4Q5T4D3 741 aa11.92□□□□□ -0.5
CLCN6-206ENST00000376496 CWF19L1Q69YN2 538 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms