RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 PCDH7O60245 1069 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 CST2P09228 141 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 PTH2RP49190 550 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 RPS3AP61247 264 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 LGI4Q8N135 537 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 HAS2Q92819 552 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 FOXRED1Q96CU9 486 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 MFSD14AQ96MC6 490 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 PINK1Q9BXM7 581 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 FAM120CQ9NX05 1096 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 SYT7O43581 403 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 OR2C1O95371 312 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 NR2C1P13056 603 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ZNF20P17024 532 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 PSMB4P28070 264 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 OR1E1P30953 314 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 AQP2P41181 271 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ASPAP45381 313 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 PRKCZQ05513 592 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ADIRFQ15847 76 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 AARDQ4LEZ3 155 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 P2RY11Q96G91 374 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 C11orf49Q9H6J7 331 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 POPDC2Q9HBU9 364 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ESR1P03372 595 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 MPIP34949 423 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 PRSS3P35030 304 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ADH7P40394 386 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 SRP9P49458 86 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 SLC25A52Q3SY17 297 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 B3GLCTQ6Y288 498 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 USP51Q70EK9 711 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 IQCF1Q8N6M8 205 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 NFKBIDQ8NI38 313 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 SPPL2BQ8TCT7 592 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ADAMTS15Q8TE58 950 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 HIST1H2AAQ96QV6 131 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 EBF4Q9BQW3 602 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 AARSD1Q9BTE6 412 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 SLC29A3Q9BZD2 475 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 TTYH3Q9C0H2 523 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ZNF629Q9UEG4 869 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 OR2T33Q8NG76 320 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 OR5M8Q8NGP6 311 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 MED8Q96G25 268 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 OR51M1Q9H341 326 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 CNTNAP1P78357 1384 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 PPP5D1E7EU14 171 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 THBS1P07996 1170 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 MPPE1Q53F39 396 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 SYT13Q7L8C5 426 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 BRIX1Q8TDN6 353 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 XAGE5Q8WWM1 108 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 RBM14Q96PK6 669 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 OR7D2Q96RA2 312 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 COPS3Q9UNS2 423 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 COL17A1Q9UMD9 1497 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 BTBD17A6NE02 478 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 hCG_2039718K7EN88 272 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ACSM4P0C7M7 580 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 PTGER3P43115 390 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 C22orf42Q6IC83 251 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 OR13C3Q8NGS6 347 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 HPSE2Q8WWQ2 592 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 TRAF4Q9BUZ4 470 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 TSPAN10Q9H1Z9 355 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 ZCCHC4Q9H5U6 513 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 OR12D3Q9UGF7 316 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 PCDHGA9Q9Y5G4 932 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 FBP1P09467 338 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ALPPL2P10696 532 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 CYP2A6P11509 494 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 PBX3P40426 434 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 LCN6P62502 163 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ZYXQ15942 572 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 SYT6Q5T7P8 510 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 FAM171A1Q5VUB5 890 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 NPRL2Q8WTW4 380 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 MTERF1Q99551 399 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 SLC38A3Q99624 504 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 TXLNGYQ9BZA5 131 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 HRH4Q9H3N8 390 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ISYNA1Q9NPH2 558 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 RIPK3Q9Y572 518 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 PTPRTO14522 1441 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 C19orf81C9J6K1 198 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 NFKBIEO00221 500 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 JAM2P57087 298 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 CAPN13Q6MZZ7 669 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 DBX2Q6ZNG2 339 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ZNF550Q7Z398 422 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 BAGE3Q86Y29 109 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 BAGE2Q86Y30 109 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 OR56A3Q8NH54 315 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 DTD1Q8TEA8 209 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 SLC7A6Q92536 515 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 TMEM143Q96AN5 459 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 LIPT1Q9Y234 373 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 HIST1H3AP68431 136 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ZNF484Q5JVG2 852 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms