RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 SCAMP1O15126 338 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 MITFO75030 526 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-202ENST00000374876 DIRAS1O95057 198 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 SEMG1P04279 462 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 NTRK1P04629 796 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 ABCB1P08183 1280 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-202ENST00000374876 GSTM2P28161 218 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 HPCAP84074 193 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 VLDLRP98155 873 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 IL1RL1Q01638 556 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 TAP2Q03519 686 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 BNIP3Q12983 259 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 RGNQ15493 299 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 COMMD6Q7Z4G1 85 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 ZNF547Q8IVP9 402 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 LAS2Q8IYD9 372 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 LMNTD1Q8N9Z9 388 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 ZFP90Q8TF47 636 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 SLC5A11Q8WWX8 675 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 TPD52L3Q96J77 140 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 MAGED4Q96JG8 741 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 LINC00615Q96LM1 132 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-202ENST00000374876 ELF4Q99607 663 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-202ENST00000374876 BHLHE41Q9C0J9 482 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-202ENST00000374876 EHD1Q9H4M9 534 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 REEP4Q9H6H4 257 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 DMRT3Q9NQL9 472 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 CCDC177Q9NQR7 707 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-202ENST00000374876 ATAD3AQ9NVI7 634 aa14.82□□□□□ -0.04
CCDC40-202ENST00000374876 ZNF282Q9UDV7 671 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-202ENST00000374876 FAF1Q9UNN5 650 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-202ENST00000374876 SDC3O75056 442 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 UGT2B11O75310 529 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 SEC14L2O76054 403 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 NUDT7P0C024 238 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 ZNF8P17098 575 aaPredicted RBP14.81□□□□□ -0.04
CCDC40-202ENST00000374876 FPR1P21462 350 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 RYKP34925 604 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 CDK3Q00526 305 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 IL5RAQ01344 420 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 EIF2B5Q13144 721 aaKnown RBP14.81□□□□□ -0.04
CCDC40-202ENST00000374876 GAB1Q13480 694 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 TUBA3CQ13748 450 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 NFE2L1Q14494 772 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 SHBQ15464 509 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 STPG1Q5TH74 334 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 XAF1Q6GPH4 301 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 DHRS4L2Q6PKH6 230 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 ANGPTL8Q6UXH0 198 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 RD3Q7Z3Z2 195 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 CYP4Z1Q86W10 505 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 SPARTQ8N0X7 666 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 SETD9Q8NE22 299 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 OR2L2Q8NH16 312 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 TSACCQ96A04 125 aaPredicted RBP14.81□□□□□ -0.04
CCDC40-202ENST00000374876 BARD1Q99728 777 aaKnown RBP14.81□□□□□ -0.04
CCDC40-202ENST00000374876 TEX101Q9BY14 249 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 NAA50Q9GZZ1 169 aaKnown RBP14.81□□□□□ -0.04
CCDC40-202ENST00000374876 DPEP2Q9H4A9 486 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 RIBC2Q9H4K1 309 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 ADPRHL2Q9NX46 363 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 ATP6V1HQ9UI12 483 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 GPR34Q9UPC5 381 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 TMEM98Q9Y2Y6 226 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 SAMHD1Q9Y3Z3 626 aaKnown RBP14.81□□□□□ -0.04
CCDC40-202ENST00000374876 SNX5Q9Y5X3 404 aa14.81□□□□□ -0.04
CCDC40-202ENST00000374876 CACNB4O00305 520 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 SAP18O00422 153 aaKnown RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 VEGFDO43915 354 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 FOXD2O60548 495 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 CER1O95813 267 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 TGFB1P01137 390 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 GBAP04062 536 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 AGXTP21549 392 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 NFATC4Q14934 902 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 TCEA2Q15560 299 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.8□□□□□ -0.048e-6■■■■■ 27.9
CCDC40-202ENST00000374876 NXPE4Q6UWF7 544 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 SGCDQ92629 289 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 CHST8Q9H2A9 424 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 TCEAL2Q9H3H9 227 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 REEP1Q9H902 201 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 EXD2Q9NVH0 621 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 SIRT5Q9NXA8 310 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 PDP1Q9P0J1 537 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 KIF17Q9P2E2 1029 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 MOSPD1Q9UJG1 213 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 GMEB1Q9Y692 573 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 DMXL1Q9Y485 3027 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 SLC1A7O00341 560 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 TOR1BO14657 336 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 SUV39H1O43463 412 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 MATN1P21941 496 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 HTR1BP28222 390 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 AQP1P29972 269 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 PCGF2P35227 344 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 CRATP43155 626 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 DAPP51397 102 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 RPS6KA3P51812 740 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 TMBIM6P55061 237 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms