RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 DENND6BQ8NEG7 585 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 DOK4Q8TEW6 326 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 ZUFSPQ96AP4 578 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 OTUB2Q96DC9 234 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.3■■□□□ 1
TM9SF3-201ENST00000371142 FLRT2O43155 660 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 NUP43Q8NFH3 380 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 FANCFQ9NPI8 374 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 SARDHQ9UL12 918 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 CDH10Q9Y6N8 788 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 DUOX1Q9NRD9 1551 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 RHOP08100 348 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 PIGFQ07326 219 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 SLC35G1Q2M3R5 365 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 ASPGQ86U10 573 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 ZNF675Q8TD23 568 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 MOAP1Q96BY2 351 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 HSPA12BQ96MM6 686 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 PTCHD1Q96NR3 888 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 OR2M4Q96R27 311 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 A0A1W2PPK0 400 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 FAM221BA6H8Z2 402 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 A8MV72 311 aaPredicted RBP21.3■■□□□ 1
TM9SF3-201ENST00000371142 RFPL1O75677 317 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 CSF2P04141 144 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 GLDCP23378 1020 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 PGGT1BP53609 377 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 RAB39AQ14964 217 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 ATXN7L3Q14CW9 347 aaPredicted RBP21.3■■□□□ 1
TM9SF3-201ENST00000371142 UBE2Q1Q7Z7E8 422 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 MEAF6Q9HAF1 191 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 FEZF1A0PJY2 475 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 C1GALT1C1LP0DN25 315 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 SLAMF1Q13291 335 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 EXOC3L2Q2M3D2 409 aa21.3■■□□□ 1
TM9SF3-201ENST00000371142 ZBTB8BQ8NAP8 495 aaPredicted RBP21.3■■□□□ 1
TM9SF3-201ENST00000371142 SOX17Q9H6I2 414 aaPredicted RBP21.3■■□□□ 1
TM9SF3-201ENST00000371142 E2F3O00716 465 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 RPS21P63220 83 aaKnown RBP21.29■■□□□ 1
TM9SF3-201ENST00000371142 GTF2IRD2BQ6EKJ0 949 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 SHQ1Q6PI26 577 aaKnown RBP21.29■■□□□ 1
TM9SF3-201ENST00000371142 GTF2IRD2Q86UP8 949 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 GLYATL1Q969I3 302 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 P2RY13Q9BPV8 354 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 GABRQQ9UN88 632 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 IFT52Q9Y366 437 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 PCDHGB6Q9Y5F9 930 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 DFNA5O60443 496 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 FESP07332 822 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 ZNF550Q7Z398 422 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 OR5J2Q8NH18 312 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 MTMR10Q9NXD2 777 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 CCRL2O00421 344 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 UQCRC1P31930 480 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 PITX1P78337 314 aaPredicted RBP21.29■■□□□ 1
TM9SF3-201ENST00000371142 TMEM107Q6UX40 140 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 DPY19L3Q6ZPD9 716 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 FAM83CQ9BQN1 747 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 ASB6Q9NWX5 421 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 ELOCQ15369 112 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 EIF2S3LQ2VIR3 472 aaKnown RBP21.29■■□□□ 1
TM9SF3-201ENST00000371142 GPRIN1Q7Z2K8 1008 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 DTX3Q8N9I9 347 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 OR5P2Q8WZ92 322 aa21.29■■□□□ 1
TM9SF3-201ENST00000371142 ENTPD1P49961 510 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 GAS6Q14393 721 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 SPATS1Q496A3 300 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 ZSWIM9Q86XI8 627 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 TRAM1L1Q8N609 369 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 HCN2Q9UL51 889 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 SGCAQ16586 387 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 GALNT12Q8IXK2 581 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 NINJ1Q92982 152 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 IL17FQ96PD4 163 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 PLCL2Q9UPR0 1127 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 A0A1W2PPW3 197 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 SNAP29O95721 258 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 NAA10P41227 235 aaPredicted RBP21.28■■□□□ 1
TM9SF3-201ENST00000371142 KCNC4Q03721 635 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 C1orf61Q13536 156 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 LIPKQ5VXJ0 399 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 TAS1R3Q7RTX0 852 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 MUS81Q96NY9 551 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 CSTAP01040 98 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 ST3GAL4Q11206 333 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 CDK10Q15131 360 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 OR4C15Q8NGM1 316 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 IMP4Q96G21 291 aaKnown RBP21.28■■□□□ 1
TM9SF3-201ENST00000371142 CCDC106Q9BWC9 280 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 MKLN1Q9UL63 735 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 A0A096LPI6 279 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 LRIT3Q3SXY7 679 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 TECRLQ5HYJ1 363 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 GID4Q8IVV7 300 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 TGM7Q96PF1 710 aa21.28■■□□□ 1
TM9SF3-201ENST00000371142 C2orf78A6NCI8 922 aa21.27■■□□□ 1
TM9SF3-201ENST00000371142 UNC119BA6NIH7 251 aa21.27■■□□□ 1
TM9SF3-201ENST00000371142 LRRN3E7EW58 273 aa21.27■■□□□ 1
TM9SF3-201ENST00000371142 NPIPA2E9PIF3 369 aa21.27■■□□□ 1
TM9SF3-201ENST00000371142 NPIPA3F8WFD2 350 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms