RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SNAP47Q5SQN1 464 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 MZT2AQ6P582 158 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 TMPRSS11AQ6ZMR5 421 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 RTL4Q6ZR62 310 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 C6orf120Q7Z4R8 191 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 CLECL1Q8IZS7 167 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 CENPSQ8N2Z9 138 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 FBXO15Q8NCQ5 510 aaPredicted RBP5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 OR5K2Q8NHB8 316 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 METTL21AQ8WXB1 218 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 MYLIPQ8WY64 445 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 AP3S1Q92572 193 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 TMIGD2Q96BF3 282 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 RNFT2Q96EX2 444 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 ALG14Q96F25 216 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 CRELD1Q96HD1 420 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 UHRF1Q96T88 793 aaPredicted RBP5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 PIP5K1AQ99755 562 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 ANKRD60Q9BZ19 345 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 UCK2Q9BZX2 261 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 TUBB1Q9H4B7 451 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 KAT8Q9H7Z6 458 aaKnown RBP5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 RIMS3Q9UJD0 308 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 CYP8B1Q9UNU6 501 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 IFT52Q9Y366 437 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 PCDHA9Q9Y5H5 950 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 ST14Q9Y5Y6 855 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 RIIAD1A6NNX1 92 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 TOR1BO14657 336 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 TPD52L2O43399 206 aaKnown RBP5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 AP1G1O43747 822 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 SNAP29O95721 258 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 DDCP20711 480 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 MYF6P23409 242 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 PCGF2P35227 344 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 FEN1P39748 380 aaKnown RBP5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 MYBPC1Q00872 1141 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 RGNQ15493 299 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 UGT3A2Q3SY77 523 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 PDZK1Q5T2W1 519 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 IRAK1BP1Q5VVH5 260 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 SLCO4C1Q6ZQN7 724 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 FUNDC1Q8IVP5 155 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 KLHDC8AQ8IYD2 350 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 OR8H2Q8N162 312 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 MFSD2AQ8NA29 543 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 DENND6BQ8NEG7 585 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 OR8J2Q8NGG1 315 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 OR2T11Q8NH01 316 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF420Q8TAQ5 688 aaPredicted RBP5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 FAM174AQ8TBP5 190 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 GAB3Q8WWW8 586 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 HTRA1Q92743 480 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 FKBP10Q96AY3 582 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 FBXL20Q96IG2 436 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF597Q96LX8 424 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 ZSWIM3Q96MP5 696 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 CCDC115Q96NT0 180 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 NELL2Q99435 816 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 CNPPD1Q9BV87 410 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 SLITRK2Q9H156 845 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 SMURF2Q9HAU4 748 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 FAIMQ9NVQ4 179 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 ABCD2Q9UBJ2 740 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 COPS7AQ9UBW8 275 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 ADAM29Q9UKF5 820 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 SARDHQ9UL12 918 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 MAN2B2Q9Y2E5 1009 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 TRPM7Q96QT4 1865 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC5A10A0PJK1 596 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 ACOT8O14734 319 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC22A1O15245 554 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 CLIC3O95833 236 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 DBTP11182 482 aaKnown RBP5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 PRG2P13727 222 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 RHCEP18577 417 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 MAGP20916 626 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 BCAP31P51572 246 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 TPTEP56180 551 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 YPEL5P62699 121 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 TAP2Q03519 686 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 NPTX1Q15818 432 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 FAM214AQ32MH5 1076 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 ARMC4Q5T2S8 1044 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 SHQ1Q6PI26 577 aaKnown RBP5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 PTRH1Q86Y79 214 aaKnown RBP5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 DCP2Q8IU60 420 aaKnown RBP5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF248Q8NDW4 579 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 C19orf18Q8NEA5 215 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 SUN3Q8TAQ9 357 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 ADAMTS18Q8TE60 1221 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 MUS81Q96NY9 551 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 DGAT2Q96PD7 388 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 TUBA1CQ9BQE3 449 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 YIPF4Q9BSR8 244 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 INPP5KQ9BT40 448 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 GPR174Q9BXC1 333 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 FZD3Q9NPG1 666 aa5.08□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC35C2Q9NQQ7 365 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 313.6 ms