RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 LIM2P55344 173 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 PCBP4P57723 403 aaKnown RBP22.6■■□□□ 1.21
SNX3-203ENST00000368979 HBA1P69905 142 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 CCL7P80098 99 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 TNFRSF17Q02223 184 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 TRAP1Q12931 704 aaKnown RBP22.6■■□□□ 1.21
SNX3-203ENST00000368979 CCNIQ14094 377 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 TCTE1Q5JU00 501 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 SNAP47Q5SQN1 464 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 TMPRSS9Q7Z410 1059 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 IFI44Q8TCB0 444 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 EXOSC8Q96B26 276 aaKnown RBP22.6■■□□□ 1.21
SNX3-203ENST00000368979 AURKBQ96GD4 344 aaPredicted RBP22.6■■□□□ 1.21
SNX3-203ENST00000368979 C10orf90Q96M02 699 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 LRRN3Q9H3W5 708 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 ZNF768Q9H5H4 540 aaKnown RBP22.6■■□□□ 1.21
SNX3-203ENST00000368979 LYRM4Q9HD34 91 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 SLAMF7Q9NQ25 335 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 CES1P1Q9UKY3 287 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 ATXN7L1Q9ULK2 861 aaPredicted RBP22.6■■□□□ 1.21
SNX3-203ENST00000368979 AP3M1Q9Y2T2 418 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 NAALAD2Q9Y3Q0 740 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 GMEB1Q9Y692 573 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 LAMA1P25391 3075 aa22.6■■□□□ 1.21
SNX3-203ENST00000368979 CPNE6O95741 557 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 RPLP0P05388 317 aaKnown RBP22.59■■□□□ 1.21
SNX3-203ENST00000368979 SEPHS1P49903 392 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 DAB2P98082 770 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 BNIP2Q12982 314 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 FLOT2Q14254 428 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 SLC48A1Q6P1K1 146 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 ZNF621Q6ZSS3 439 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 JADE3Q92613 823 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 PCDHAC1Q9H158 963 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 PDP2Q9P2J9 529 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 ZNF282Q9UDV7 671 aaPredicted RBP22.59■■□□□ 1.21
SNX3-203ENST00000368979 UTS2RQ9UKP6 389 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 VPS4AQ9UN37 437 aa22.59■■□□□ 1.21
SNX3-203ENST00000368979 CROCCQ5TZA2 2017 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 FITM1A5D6W6 292 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 H3BMH7 237 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 DNAJB6O75190 326 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 MED26O95402 600 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 RETP07949 1114 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 NR2F6P10588 404 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 NELFEP18615 380 aaKnown RBP22.58■■□□□ 1.21
SNX3-203ENST00000368979 BUD31P41223 144 aaPredicted RBP22.58■■□□□ 1.21
SNX3-203ENST00000368979 ARL4DP49703 201 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 GAB1Q13480 694 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 KCNAB1Q14722 419 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 FXNQ16595 210 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 NDUFA9Q16795 377 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 INAVAQ3KP66 663 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 GARNL3Q5VVW2 1013 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 FAM180BQ6P0A1 224 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 ZNF574Q6ZN55 896 aaPredicted RBP22.58■■□□□ 1.21
SNX3-203ENST00000368979 GPR155Q7Z3F1 870 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 KCTD14Q9BQ13 255 aaPredicted RBP22.58■■□□□ 1.21
SNX3-203ENST00000368979 THUMPD3Q9BV44 507 aaKnown RBP22.58■■□□□ 1.21
SNX3-203ENST00000368979 NPLQ9BXD5 320 aaPredicted RBP22.58■■□□□ 1.21
SNX3-203ENST00000368979 TRIM4Q9C037 500 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 KAT8Q9H7Z6 458 aaKnown RBP22.58■■□□□ 1.21
SNX3-203ENST00000368979 TAS2R9Q9NYW1 312 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 PCDHGB4Q9UN71 923 aa22.58■■□□□ 1.21
SNX3-203ENST00000368979 ZNF860A6NHJ4 632 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 PGRMC2O15173 223 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 NVLO15381 856 aaKnown RBP22.57■■□□□ 1.2
SNX3-203ENST00000368979 ANKRD34CP0C6C1 535 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 MSL3P1P0C860 447 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 CPN2P22792 545 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 GRK6P43250 576 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 OLR1P78380 273 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 PTRH1Q86Y79 214 aaKnown RBP22.57■■□□□ 1.2
SNX3-203ENST00000368979 SUMF1Q8NBK3 374 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 OR4D9Q8NGE8 314 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 OR5P2Q8WZ92 322 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 ZNF583Q96ND8 569 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 DPYSL5Q9BPU6 564 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 ECSITQ9BQ95 431 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 ANKHQ9HCJ1 492 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 SLC35C2Q9NQQ7 365 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 PRDM9Q9NQV7 894 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 ACSS1Q9NUB1 689 aaPredicted RBP22.57■■□□□ 1.2
SNX3-203ENST00000368979 MS4A12Q9NXJ0 267 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 ZNF318Q5VUA4 2279 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 COL5A1P20908 1838 aaPredicted RBP22.57■■□□□ 1.2
SNX3-203ENST00000368979 GLOD5A6NK44 160 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 WASHC1A8K0Z3 465 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 A8MU76 341 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 CLIC1O00299 241 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 ABCB1P08183 1280 aaPredicted RBP22.57■■□□□ 1.2
SNX3-203ENST00000368979 HTR1EP28566 365 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 EMP3P54852 163 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 SLC14A1Q13336 389 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 MLC1Q15049 377 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 IFNEQ86WN2 208 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 CA13Q8N1Q1 262 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 ZFP90Q8TF47 636 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 N4BP2L2Q92802 583 aaPredicted RBP22.57■■□□□ 1.2
SNX3-203ENST00000368979 CSF3RQ99062 836 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms