RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SNX6Q9UNH7 406 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 GPR34Q9UPC5 381 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 PCDHB14Q9Y5E9 798 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 SNX5Q9Y5X3 404 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 KCNE1BA0A087WTH5 132 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 PRSS38A1L453 326 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 TRIM64A6NGJ6 449 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 H0YAE9 185 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 M0R3G1 203 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 AP3D1O14617 1153 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 CREG1O75629 220 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 SRFP11831 508 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 CASP3P42574 277 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 P2RX3P56373 397 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 IL5RAQ01344 420 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 KCNAB2Q13303 367 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 COL19A1Q14993 1142 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 SMAD2Q15796 467 aaKnown RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 METRNLQ641Q3 311 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 ZNF773Q6PK81 442 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 Q6ZSR6 202 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 DGLUCYQ7Z3D6 616 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 ADHFE1Q8IWW8 467 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 C1orf52Q8N6N3 182 aaKnown RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 ZNF548Q8NEK5 533 aaPredicted RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 OR7G3Q8NG95 312 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 PNPT1Q8TCS8 783 aaKnown RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 NETO1Q8TDF5 533 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 FKBP10Q96AY3 582 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 ITCHQ96J02 903 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 ZNF514Q96K75 400 aaPredicted RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 TTYH2Q9BSA4 534 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 KLHL42Q9P2K6 505 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 BAG5Q9UL15 447 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 DYRK1BQ9Y463 629 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 FPGTO14772 594 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 PPM1DO15297 605 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 SLC16A5O15375 505 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 DIRAS1O95057 198 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 FKBP9O95302 570 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 CPSF4O95639 269 aaKnown RBP10.17□□□□□ -0.78
TPM3-212ENST00000368533 AGXTP21549 392 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 HKDC1Q2TB90 917 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 KIAA1161Q6NSJ0 714 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 ZCCHC8Q6NZY4 707 aaKnown RBP10.17□□□□□ -0.78
TPM3-212ENST00000368533 ZNF621Q6ZSS3 439 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 FKBP9P1Q75LS8 142 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 ADCK1Q86TW2 530 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 MMP21Q8N119 569 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 TCAIMQ8N3R3 496 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 TMEM132CQ8N3T6 1108 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 SDR16C5Q8N3Y7 309 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 LINC01555Q8NAE3 123 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 TSTD1Q8NFU3 115 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 OR7A2PQ8NGA2 310 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 OR4E2Q8NGC2 313 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 RNF31Q96EP0 1072 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 MAP6Q96JE9 813 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 DACH2Q96NX9 599 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 FCRL4Q96PJ5 515 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 TMEM246Q9BRR3 403 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 WDR12Q9GZL7 423 aaKnown RBP10.17□□□□□ -0.78
TPM3-212ENST00000368533 GPN2Q9H9Y4 310 aaPredicted RBP10.17□□□□□ -0.78
TPM3-212ENST00000368533 FAM118AQ9NWS6 357 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 ENPP5Q9UJA9 477 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 SPEF1Q9Y4P9 236 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 GNG14A0A1W2PPG7 69 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 UPK1AO00322 258 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 RFXANKO14593 260 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 CPNE6O95741 557 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 KRT8P05787 483 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 JUPP14923 745 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 PIGAP37287 484 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 NCS1P62166 190 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 GALK2Q01415 458 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 SIM2Q14190 667 aaPredicted RBP10.17□□□□□ -0.78
TPM3-212ENST00000368533 DPY19L1Q2PZI1 675 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 ADPRMQ3LIE5 342 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 PRAMEF13Q5VWM6 474 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 ZNF852Q6ZMS4 543 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 NEK10Q6ZWH5 1172 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 SPARTQ8N0X7 666 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 ASCC1Q8N9N2 400 aaKnown RBP10.17□□□□□ -0.78
TPM3-212ENST00000368533 GLB1L3Q8NCI6 653 aaPredicted RBP10.17□□□□□ -0.78
TPM3-212ENST00000368533 USP7Q93009 1102 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 RAD51AP1Q96B01 352 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 RIBC2Q9H4K1 309 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 TTC28Q96AY4 2481 aa10.17□□□□□ -0.78
TPM3-212ENST00000368533 EVPLLA8MZ36 301 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 RGS13O14921 159 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 DYRK3O43781 588 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 SCO1O75880 301 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 SCELO95171 688 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 SDC1P18827 310 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 CD40LGP29965 261 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 MRPL19P49406 292 aaKnown RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 MLLT1Q03111 559 aaPredicted RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 CTF1Q16619 201 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 OR4F3Q6IEY1 312 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 TSSK4Q6SA08 328 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms