RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 EPOP01588 193 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 EDN1P05305 212 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 HTR1AP08908 422 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 SRCP12931 536 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 MSX1P28360 303 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 PITPNAQ00169 270 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 FAM214AQ32MH5 1076 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 RNF111Q6ZNA4 994 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ZDHHC14Q8IZN3 488 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 C3orf58Q8NDZ4 430 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 FIZ1Q96SL8 496 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 BEX2Q9BXY8 128 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 BEX1Q9HBH7 125 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 CLDN25C9JDP6 229 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 SOCS2O14508 198 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 CKMT1AP12532 417 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 BNIP3Q12983 259 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ERI1Q8IV48 349 aaKnown RBP12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF283Q8N7M2 679 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 PNPLA2Q96AD5 504 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ITPAQ9BY32 194 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 LMAN1LQ9HAT1 526 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 TRIM36Q9NQ86 728 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 BACE2Q9Y5Z0 518 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 NFS1Q9Y697 457 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 NUP188Q5SRE5 1749 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 TIA1P31483 386 aaKnown RBP eCLIP12.37□□□□□ -0.433e-7■■■■□ 25
PTPRK-207ENST00000368226 SLC6A6P31641 620 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 SPINT3P49223 89 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 FCHO2Q0JRZ9 810 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 CNPY1Q3B7I2 92 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF554Q86TJ5 538 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 ZBTB8BQ8NAP8 495 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 PDPRQ8NCN5 879 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 CNIH3Q8TBE1 160 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 CCDC115Q96NT0 180 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 METTL8Q9H825 291 aaKnown RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 CBFA2T3O75081 653 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 SYNGR4O95473 234 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 PTGER1P34995 402 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 DNAJB13P59910 316 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 WDR5P61964 334 aaKnown RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF252P-AS1Q0IIN9 211 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 NADK2Q4G0N4 442 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 TMED4Q7Z7H5 227 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 BOLLQ8N9W6 283 aaKnown RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 OR5T2Q8NGG2 359 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 PRR11Q96HE9 360 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 ERMAPQ96PL5 475 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 STRA6Q9BX79 667 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 PRDM4Q9UKN5 801 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 OR52A4PA6NMU1 304 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 SMAD6O43541 496 aaKnown RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 ADH7P40394 386 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 RAB33AQ14088 237 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 EXOC3L2Q2M3D2 409 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 TMEM44Q2T9K0 475 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF317Q96PQ6 595 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 RPF2Q9H7B2 306 aaKnown RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 LIN28AQ9H9Z2 209 aaKnown RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 SPO11Q9Y5K1 396 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 IGKV6-21A0A0C4DH24 114 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 A6NL46 340 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 GSTT2BP0CG30 244 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 BCKDHAP12694 445 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 FPR1P21462 350 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 ENTPD1P49961 510 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF234Q14588 700 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 TYSND1Q2T9J0 566 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 SFT2D3Q587I9 215 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 NKAPLQ5M9Q1 402 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 CLECL1Q8IZS7 167 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 OR5AR1Q8NGP9 310 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 RLN3Q8WXF3 142 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 CASD1Q96PB1 797 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 DCSTAMPQ9H295 470 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 SMURF1Q9HCE7 757 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 KCMF1Q9P0J7 381 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 NPIPB15A6NHN6 443 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 MAN2B1O00754 1011 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 VEGFDO43915 354 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 MPC1LP0DKB6 136 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 DUSP3P51452 185 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 S100A10P60903 97 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 OR4C11Q6IEV9 310 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 NXPE4Q6UWF7 544 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 DENND1AQ8TEH3 1009 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 RAB2BQ8WUD1 216 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 FCGR1BQ92637 280 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF689Q96CS4 500 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-207ENST00000368226 SMIM14Q96QK8 99 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 POPDC3Q9HBV1 291 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 EURLQ9NYK6 297 aa12.37□□□□□ -0.43
PTPRK-207ENST00000368226 IGKV6D-21A0A0A0MT36 114 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 H3BSA7 217 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 C5AR1P21730 350 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 SLC36A4Q6YBV0 504 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 GNPDA2Q8TDQ7 276 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 SRA1Q9HD15 236 aaKnown RBP12.36□□□□□ -0.43
PTPRK-207ENST00000368226 A0A1B0GVI7 797 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms