RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 FURINP09958 794 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 SLC35G6P0C7Q6 338 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 GIMD1P0DJR0 217 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 TYRP1P17643 537 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 EPHA8P29322 1005 aaPredicted RBP11.46□□□□□ -0.57
USF1-203ENST00000368021 LSSP48449 732 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 NUP107P57740 925 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 TGM3Q08188 693 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 TRIM25Q14258 630 aaKnown RBP11.46□□□□□ -0.57
USF1-203ENST00000368021 PUM1Q14671 1186 aaKnown RBP eCLIP11.46□□□□□ -0.57
USF1-203ENST00000368021 MANEAQ5SRI9 462 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 C6orf10Q5SRN2 563 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 ANXA8L1Q5VT79 327 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 TRIM40Q6P9F5 258 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 ABHD17CQ6PCB6 329 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 RNF44Q7L0R7 432 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 ZNF438Q7Z4V0 828 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 ASPGQ86U10 573 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 VPS37AQ8NEZ2 397 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 CDC26Q8NHZ8 85 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 DNAJB14Q8TBM8 379 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 RHBDD1Q8TEB9 315 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 JADE3Q92613 823 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 TMEM125Q96AQ2 219 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 TBCDQ9BTW9 1192 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 DUSP26Q9BV47 211 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 DUSP23Q9BVJ7 150 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 MRPS26Q9BYN8 205 aaKnown RBP11.46□□□□□ -0.57
USF1-203ENST00000368021 BHLHE41Q9C0J9 482 aaPredicted RBP11.46□□□□□ -0.57
USF1-203ENST00000368021 ABCG4Q9H172 646 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 SYNPO2LQ9H987 977 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 CMTM6Q9NX76 183 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 GIN1Q9NXP7 522 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 UBAP1Q9NZ09 502 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 NLGN3Q9NZ94 848 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 EPHA6Q9UF33 1036 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 BCAP29Q9UHQ4 241 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 EXO1Q9UQ84 846 aaKnown RBP11.46□□□□□ -0.57
USF1-203ENST00000368021 PCNX2A6NKB5 2137 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 TRBV5-3A0A0A0MS03 114 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 A0A0A6YYD5 115 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 PRSS51A0A1B0GVH4 220 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 URADA6NGE7 173 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 RHPN2P1A8MT19 583 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 RTCAO00442 366 aaKnown RBP11.46□□□□□ -0.58
USF1-203ENST00000368021 ERI3O43414 337 aaKnown RBP11.46□□□□□ -0.58
USF1-203ENST00000368021 TBX19O60806 448 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 SCELO95171 688 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 LAMP1P11279 417 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 GLB1P16278 677 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 DDX5P17844 614 aaKnown RBP11.46□□□□□ -0.58
USF1-203ENST00000368021 SDHBP21912 280 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 SSR2P43308 183 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 GPR3P46089 330 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 PLA2G16P53816 162 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 WNT3P56703 355 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 TRAP1Q12931 704 aaKnown RBP11.46□□□□□ -0.58
USF1-203ENST00000368021 SLC14A1Q13336 389 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 NR1D2Q14995 579 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 HEPACAMQ14CZ8 416 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 OR4F3Q6IEY1 312 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 KANSL1Q7Z3B3 1105 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 ZCCHC7Q8N3Z6 543 aaKnown RBP11.46□□□□□ -0.58
USF1-203ENST00000368021 CAMKVQ8NCB2 501 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 SAP25Q8TEE9 199 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 GAL3ST3Q96A11 431 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 TM4SF18Q96CE8 201 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 COX4I2Q96KJ9 171 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 ECSITQ9BQ95 431 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 C17orf62Q9BQA9 187 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 SORBS1Q9BX66 1292 aaKnown RBP11.46□□□□□ -0.58
USF1-203ENST00000368021 KLHL31Q9H511 634 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 C1GALT1Q9NS00 363 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 TBC1D23Q9NUY8 699 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 VAPAQ9P0L0 249 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 BTNL2Q9UIR0 455 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 AP3M1Q9Y2T2 418 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 NEUROG3Q9Y4Z2 214 aa11.46□□□□□ -0.58
USF1-203ENST00000368021 FREM2Q5SZK8 3169 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 RNASET2O00584 256 aaKnown RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 RFXANKO14593 260 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 ACOT8O14734 319 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 MTRF1O75570 445 aaKnown RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 SERPINB7O75635 380 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 BCAS2O75934 225 aaPredicted RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 IL3P08700 152 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 HOXB9P17482 250 aaPredicted RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 DDCP20711 480 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 HIST1H1TP22492 207 aaPredicted RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 PTPN6P29350 595 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 NOVA1P51513 510 aaKnown RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 EEFSECP57772 596 aaKnown RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 PPP1CAP62136 330 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 C2orf80Q0P641 193 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 SUZ12Q15022 739 aaKnown RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 TOR1AIP1Q5JTV8 583 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 ZNF793Q6ZN11 406 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 NAXDQ8IW45 347 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 SLC35F3Q8IY50 421 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms