RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OSTM1Q86WC4 334 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SCN4BQ8IWT1 228 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 OR6P1Q8NGX9 317 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ACDQ96AP0 544 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ABCG4Q9H172 646 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ARHGAP20Q9P2F6 1191 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 H3BSA7 217 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 M0QYV0 167 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 DCLK1O15075 740 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SIGLEC6O43699 453 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SLC22A5O76082 557 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 C1QBP02746 253 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CYC1P08574 325 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 HERVK_113P62684 666 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 WSCD1Q658N2 575 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 KCTD18Q6PI47 426 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CENPSQ8N2Z9 138 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 WACQ9BTA9 647 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 LRRC26Q2I0M4 334 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SLC25A52Q3SY17 297 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 RNF141Q8WVD5 230 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ACTR8Q9H981 624 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM150BA6NC51 233 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ARMC6Q6NXE6 501 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NIPAL3Q6P499 406 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GLIS3Q8NEA6 775 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 DDIT4Q9NX09 232 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 OPTCQ9UBM4 332 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NWD1Q149M9 1564 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 H3BSH0 61 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CLCNKAP51800 687 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ARSKQ6UWY0 536 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ENTHD1Q8IYW4 607 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 OR10Q1Q8NGQ4 319 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GOT1L1Q8NHS2 421 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 MR1Q95460 341 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PINK1Q9BXM7 581 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NIFKQ9BYG3 293 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 MTIF3Q9H2K0 278 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TMPRSS5Q9H3S3 457 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TRPC4Q9UBN4 977 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TYROBPO43914 113 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CD1AP06126 327 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CALCBP10092 127 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CD36P16671 472 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PIGFQ07326 219 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 XKR4Q5GH76 650 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TYW3Q6IPR3 259 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CD300LDQ6UXZ3 194 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NKX6-2Q9C056 277 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FAM217BQ9NTX9 383 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 LMCD1Q9NZU5 365 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PCDHB11Q9Y5F2 797 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 AZIN1O14977 448 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TAS2R39P59534 338 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 RPA4Q13156 261 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 P2RY14Q15391 338 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 DERL2Q9GZP9 239 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PRPH2P23942 346 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CBWD3Q5JTY5 395 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CBWD5Q5RIA9 395 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FIP1L1Q6UN15 594 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 RBMS3Q6XE24 437 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SLC36A4Q6YBV0 504 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FITM2Q8N6M3 262 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF354BQ96LW1 612 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 DOLKQ9UPQ8 538 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 STRAPQ9Y3F4 350 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ADGRB2O60241 1585 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 AGPSO00116 658 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FANCGO15287 622 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SDC3O75056 442 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 EDN1P05305 212 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 MPSTP25325 297 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PRPS1P60891 318 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ISXQ2M1V0 245 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 DLK2Q6UY11 383 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PAPD5Q8NDF8 572 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 WDR34Q96EX3 536 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SNHG28P0DPA3 235 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PRG2P13727 222 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NDUFB7P17568 137 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GALNT2Q10471 571 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GK2Q14410 553 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ERFEQ4G0M1 354 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FNDC3BQ53EP0 1204 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 C12orf40Q86WS4 652 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SLC24A4Q8NFF2 622 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 RPF2Q9H7B2 306 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GXYLT2A0PJZ3 443 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 A6NL46 340 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 DIRAS3O95661 229 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PLGP00747 810 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GBAP04062 536 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NAAAQ02083 359 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 EEF1A2Q05639 463 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SCARB2Q14108 478 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 EOGTQ5NDL2 527 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FAM102AQ5T9C2 384 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 BOLLQ8N9W6 283 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms