RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 C14orf28Q4W4Y0 310 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 C6orf52Q5T4I8 152 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 PRAMEF17Q5VTA0 474 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 GRHL2Q6ISB3 625 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 NEPROQ6NW34 567 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 C1orf186Q6ZWK4 172 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 USP49Q70CQ1 688 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ARHGAP12Q8IWW6 846 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 SGIP1Q9BQI5 828 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 TTYH2Q9BSA4 534 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 TLR10Q9BXR5 811 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 IL22Q9GZX6 179 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 MUC13Q9H3R2 512 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 FETUBQ9UGM5 382 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 RAI2Q9Y5P3 530 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 ARL5AQ9Y689 179 aa8.33□□□□□ -1.08
SYNE1-206ENST00000367253 A0A0A0MRY4 1105 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 LOC102723532A0A0G2JNH3 316 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 MAGEB4O15481 346 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SUV39H1O43463 412 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 RP2O75695 350 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 CTDNEP1O95476 244 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 LGI1O95970 557 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 MGAT1P26572 445 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF81P51508 661 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 CLCN5P51795 746 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 LGALS4P56470 323 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 RGS8P57771 180 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 TSPAN5P62079 268 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 MALLQ13021 153 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 CAPSQ13938 189 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ARSIQ5FYB1 569 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 CMTM8Q8IZV2 173 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 COX18Q8N8Q8 333 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 PLEKHO2Q8TD55 490 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF431Q8TF32 576 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 AGAP2Q99490 1192 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 HOPXQ9BPY8 73 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 UTP23Q9BRU9 249 aaKnown RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 PADI1Q9ULC6 663 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 FKBP7Q9Y680 259 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ATRNL1Q5VV63 1379 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 FUOMA2VDF0 154 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ANKUB1A6NFN9 424 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 BBIP1A8MTZ0 92 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 HSBP1L1C9JCN9 74 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 B4GALT4O60513 344 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 CIDEAO60543 219 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 RPLP0P05388 317 aaKnown RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 FAM86B2P0C5J1 330 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 HSD3B1P14060 373 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 IGFBP5P24593 272 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 WDR5P61964 334 aaKnown RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF829Q3KNS6 432 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SLC22A15Q8IZD6 547 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 MARK4Q96L34 752 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 TGM7Q96PF1 710 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 BLOC1S4Q9NUP1 217 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ASF1BQ9NVP2 202 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 GPATCH2LQ9NWQ4 482 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SAMD4AQ9UPU9 718 aaKnown RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 PTRH2Q9Y3E5 179 aaKnown RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SIPA1L3O60292 1781 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 FIGNL2A6NMB9 653 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SLC33A1O00400 549 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SURF4O15260 269 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 KLRC4O43908 158 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 OR1I1O60431 355 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 EDF1O60869 148 aaKnown RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 OR4Q2P0C623 313 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SRFP11831 508 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 GP1BBP13224 206 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 RPS9P46781 194 aaKnown RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 MAT1AQ00266 395 aaKnown RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF616Q08AN1 781 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 C19orf57Q0VDD7 668 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SHHQ15465 462 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 GXYLT1Q4G148 440 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 AHSA2Q719I0 299 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 OR11L1Q8NGX0 322 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 NELL1Q92832 810 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 PEX13Q92968 403 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 CRB3Q9BUF7 120 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 EGFL7Q9UHF1 273 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 NUP98P52948 1817 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 TRAV6A0A075B6T7 132 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 A6NLC8 198 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SLC22A1O15245 554 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 PTHP01270 115 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ABHD2P08910 425 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 DDCP20711 480 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SLC15A1P46059 708 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 VAMP2P63027 116 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF33AQ06730 810 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 PTPRNQ16849 979 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 REP15Q6BDI9 236 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 BAIAP2L2Q6UXY1 529 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF517Q6ZMY9 492 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF571Q7Z3V5 609 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 RANBP3LQ86VV4 465 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms