RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ANKRD26P1Q6NSI1 321 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D3Q8IZP1 549 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 MS4A15Q8N5U1 240 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 FUZQ9BT04 418 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF432O94892 652 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 SEMA3DO95025 777 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 DRD2P14416 443 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 ADRA1AP35348 466 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 GGT5P36269 586 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 NFE2L1Q14494 772 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 OR6Q1Q8NGQ2 317 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 VMP1Q96GC9 406 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TMED9Q9BVK6 235 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 PCDHGB2Q9Y5G2 931 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 SPTA1P02549 2419 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 SH3RF2Q8TEC5 729 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 WACQ9BTA9 647 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 SRMSQ9H3Y6 488 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 SIAEQ9HAT2 523 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 MALT1Q9UDY8 824 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 FLRT2O43155 660 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 FAM214AQ32MH5 1076 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 IQCHQ86VS3 1027 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 CACUL1Q86Y37 369 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 SAMD12Q8N8I0 201 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 KREMEN2Q8NCW0 462 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TFGQ92734 400 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TMEM246Q9BRR3 403 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 HERC2P3Q9BVR0 1158 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 USP3Q9Y6I4 520 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 MICAQ29983 383 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 UTS2BQ765I0 119 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 C7orf57Q8NEG2 295 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF548Q8NEK5 533 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 SLC6A6P31641 620 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF689Q96CS4 500 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 BACE2Q9Y5Z0 518 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF840PA6NDX5 716 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 I3L521 148 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 NR2C1P13056 603 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 RPL17P18621 184 aaKnown RBP11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 SWI5Q1ZZU3 235 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 CADM2Q8N3J6 435 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 RPLP0P6Q8NHW5 317 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 SARDHQ9UL12 918 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 CLEC4AQ9UMR7 237 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 GABBR2O75899 941 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 DNM1P34Q6PK57 102 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TMIGD2Q96BF3 282 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF354BQ96LW1 612 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 GATBO75879 557 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 APOL3O95236 402 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 C1GALT1C1LP0DN25 315 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 ATP5A1P25705 553 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 SEC23BQ15437 767 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 MRI1Q9BV20 369 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 PRELID1Q9Y255 219 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 PCDHGA4Q9Y5G9 962 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 CA12O43570 354 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 PCCBP05166 539 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 GIMD1P0DJR0 217 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 HNF1BP35680 557 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 IGFALSP35858 605 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 KCNC1P48547 511 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 Q6ZNX1 250 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 OR10Q1Q8NGQ4 319 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 GLYATL1Q969I3 302 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 PITHD1Q9GZP4 211 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 IFT46Q9NQC8 304 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 ABCG2Q9UNQ0 655 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 KANTRA0A1W2PQU2 76 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 SAP18O00422 153 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 ACOT8O14734 319 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 AK1P00568 194 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 PROKR1Q8TCW9 393 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 CLMPQ9H6B4 373 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 UBQLN2Q9UHD9 624 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 SEC14L2O76054 403 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 JUNP05412 331 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 MAD2L1BPQ15013 274 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 GGTA1PQ4G0N0 100 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF805Q5CZA5 627 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 SLC30A6Q6NXT4 461 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 OR52E4Q8NGH9 312 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 FANK1Q8TC84 345 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 TMEM189-UBE2V1I3L0A0 370 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 KMOO15229 486 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 SLC16A6O15403 523 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 RNASE11Q8TAA1 199 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 RAB7BQ96AH8 199 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 GKN1Q9NS71 199 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 TAS2R10Q9NYW0 307 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 VAPAQ9P0L0 249 aa11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 TPD52L2O43399 206 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 RGS9O75916 674 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 SORBS2O94875 1100 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-202ENST00000366764 AKR1D1P51857 326 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms