RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 LIX1Q8N485 282 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 MR1Q95460 341 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 NXPE2Q96DL1 559 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 EGLN2Q96KS0 407 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 CHST8Q9H2A9 424 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 SLC26A1Q9H2B4 701 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 MYNNQ9NPC7 610 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 MKKSQ9NPJ1 570 aaPredicted RBP11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 TRPC4Q9UBN4 977 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 BAIAP2L1Q9UHR4 511 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 FBXW2Q9UKT8 454 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 AK5Q9Y6K8 562 aa11.71□□□□□ -0.54
NIF3L1-201ENST00000359683 AHCTF1Q8WYP5 2266 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 WDFY3Q8IZQ1 3526 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 ACACAQ13085 2346 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 VSTM2BA6NLU5 285 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 STMND1H3BQB6 276 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 ANKRD28O15084 1053 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 ZZEF1O43149 2961 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 BMP10O95393 424 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 IDO1P14902 403 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 CPN2P22792 545 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 ASMTP46597 345 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 MRPL19P49406 292 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 CLDN8P56748 225 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 IRX1P78414 480 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 C18orf63Q68DL7 685 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 MRPL14Q6P1L8 145 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 FAM199XQ6PEV8 388 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 RIPOR1Q6ZS17 1223 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 IKBIPQ70UQ0 350 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 DTX1Q86Y01 620 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 FAM9CQ8IZT9 166 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 NLGN4XQ8N0W4 816 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 ESX1Q8N693 406 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 NLGN4YQ8NFZ3 816 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 ADAMTS18Q8TE60 1221 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 FKBP10Q96AY3 582 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 TBC1D20Q96BZ9 403 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 PEX11GQ96HA9 241 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 ZNF578Q96N58 590 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 TSSK3Q96PN8 268 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 OR1F2PQ96R84 312 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 BRINP2Q9C0B6 783 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 TGIF2Q9GZN2 237 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 THSD1Q9NS62 852 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 TEX10Q9NXF1 929 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 IFT80Q9P2H3 777 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 ZNF282Q9UDV7 671 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 TRIM33Q9UPN9 1127 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 EXO1Q9UQ84 846 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 PCDHA9Q9Y5H5 950 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 SPACA6W5XKT8 324 aa11.7□□□□□ -0.54
NIF3L1-201ENST00000359683 FAM227AF5H4B4 570 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 RAD1O60671 282 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 CAPNS1P04632 268 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 IL3P08700 152 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 DRD2P14416 443 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 TLX1P31314 330 aaPredicted RBP11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 XCR1P46094 333 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 ATP4BP51164 291 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 C21orf58P58505 322 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 TNFRSF17Q02223 184 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 KLC1Q07866 573 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 C2orf80Q0P641 193 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 PTGR1Q14914 329 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 PDCD4Q53EL6 469 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 NDUFAF5Q5TEU4 345 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 FAM198BQ6UWH4 519 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 RIMKLAQ8IXN7 391 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 UCN3Q969E3 161 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 CATSPER2Q96P56 530 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 CSF3RQ99062 836 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 YIPF2Q9BWQ6 316 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 FAIM2Q9BWQ8 316 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 ACTL8Q9H568 366 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 ZNF385DQ9H6B1 395 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 CCDC86Q9H6F5 360 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 PRDM9Q9NQV7 894 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 SDR39U1Q9NRG7 319 aaPredicted RBP11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 LANCL2Q9NS86 450 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 HEY2Q9UBP5 337 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 G3BP2Q9UN86 482 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 ARL2BPQ9Y2Y0 163 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 APC2O95996 2303 aa11.69□□□□□ -0.54
NIF3L1-201ENST00000359683 C1orf226A1L170 272 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 BLACEA4D250 179 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 PSMD12O00232 456 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 PRMT3O60678 531 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 CNOT3O75175 753 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 AIFM1O95831 613 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 FHP07954 510 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 CD63P08962 238 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 RAB40ALP0C0E4 278 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 PRPS1L1P21108 318 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 BUD31P41223 144 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 MC1RQ01726 317 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 OCA2Q04671 838 aa11.68□□□□□ -0.54
NIF3L1-201ENST00000359683 HEPACAMQ14CZ8 416 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms