RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 OR2I1PQ8NGU4 316 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 OR8K5Q8NH50 307 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 ZCCHC10Q8TBK6 192 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 UTP15Q8TED0 518 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 JADE3Q92613 823 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 STMN2Q93045 179 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 CCDC74AQ96AQ1 378 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 CCDC115Q96NT0 180 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 PAIP1Q9H074 479 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 SERHLQ9NQF3 203 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 SLAMF8Q9P0V8 285 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 MSRB2Q9Y3D2 182 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 NEUROG3Q9Y4Z2 214 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 MN1Q10571 1320 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 NUP214P35658 2090 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 LOC105369274A0A096LPK9 316 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 LOC102723532A0A0G2JNH3 316 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 PRSS51A0A1B0GVH4 220 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 PRORSD1PA6NEY8 169 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 NVLO15381 856 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 PRAMEF10O60809 474 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 SORBS2O94875 1100 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 EIF2S1P05198 315 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 HSD17B1P14061 328 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 DRD2P14416 443 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 CERS1P27544 350 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 ALDH9A1P49189 494 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 VSX2P58304 361 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 MC1RQ01726 317 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 BNIP2Q12982 314 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 SLAMF1Q13291 335 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 SLC14A1Q13336 389 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 FLOT2Q14254 428 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 ZNF385BQ569K4 471 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 FBXW10Q5XX13 1052 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 MRM1Q6IN84 353 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 NANOGP8Q6NSW7 305 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 SPRED1Q7Z699 444 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 TICAM1Q8IUC6 712 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 OR4N4Q8N0Y3 316 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 RNF148Q8N7C7 305 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 Q8N9G6 341 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 ASB9Q96DX5 294 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 ANKRD27Q96NW4 1050 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 PANX1Q96RD7 426 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 SERINC2Q96SA4 455 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 INPP5KQ9BT40 448 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 CHRNA10Q9GZZ6 450 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 RASSF4Q9H2L5 321 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 MUC13Q9H3R2 512 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 NANOGQ9H9S0 305 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 FAM60AQ9NP50 221 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 SOHLH2Q9NX45 425 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 CMTM6Q9NX76 183 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 VAPAQ9P0L0 249 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 CD300AQ9UGN4 299 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 BTBD3Q9Y2F9 522 aa13.13□□□□□ -0.31
PDLIM5-203ENST00000359265 TRBV5-3A0A0A0MS03 114 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 B4GAT1O43505 415 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 B3GALT2O43825 422 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 SH3BP5O60239 455 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 SRPX2O60687 465 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 SCN2BO60939 215 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 ENTPD5O75356 428 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 ZBTB11O95625 1053 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 CPSF4O95639 269 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 ATP6V1G2O95670 118 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 C9P02748 559 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 SMIM10L1P0DMW3 83 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 CEACAM1P13688 526 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 HOXB9P17482 250 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 ALOX12P18054 663 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 TCN1P20061 433 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 BTN3A2P78410 334 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 DAB2P98082 770 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 LIPEQ05469 1076 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 TRAP1Q12931 704 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 DEFB110Q30KQ9 67 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 AMZ1Q400G9 498 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 RUNDC3AQ59EK9 446 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 RABL3Q5HYI8 236 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 NKAIN2Q5VXU1 208 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 MCATQ8IVS2 390 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 CLECL1Q8IZS7 167 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 DNAJC22Q8N4W6 341 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 AMER3Q8N944 861 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 FAM47BQ8NA70 645 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 MIEF2Q96C03 454 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 SMIM10Q96HG1 83 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 CPPED1Q9BRF8 314 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 EDEM2Q9BV94 578 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 ALG2Q9H553 416 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 PDE7BQ9NP56 450 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 TMEM9BQ9NQ34 198 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 TEX10Q9NXF1 929 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 EHD3Q9NZN3 535 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 ZNF282Q9UDV7 671 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 PHF11Q9UIL8 331 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 VPS4AQ9UN37 437 aa13.12□□□□□ -0.31
PDLIM5-203ENST00000359265 PCDHGB4Q9UN71 923 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms