RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 ACADLP28330 430 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 TSTA3Q13630 321 aaPredicted RBP17.77■□□□□ 0.43
SNX11-201ENST00000359238 CCINQ13939 588 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 TCEA2Q15560 299 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 DUSP7Q16829 419 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 CEP78Q5JTW2 689 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 KIAA1324Q6UXG2 1013 aaKnown RBP17.77■□□□□ 0.43
SNX11-201ENST00000359238 Q6ZS52 159 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 SIX5Q8N196 739 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 LIX1Q8N485 282 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 OR5AR1Q8NGP9 310 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 FCGR1BQ92637 280 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 APOL4Q9BPW4 351 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 ZCCHC2Q9C0B9 1178 aaKnown RBP17.77■□□□□ 0.43
SNX11-201ENST00000359238 NUAK2Q9H093 628 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 OR52A5Q9H2C5 316 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 PRELID1Q9Y255 219 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 CA5BQ9Y2D0 317 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 GPSM3Q9Y4H4 160 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 PEX16Q9Y5Y5 336 aa17.77■□□□□ 0.43
SNX11-201ENST00000359238 PNMA8CA0A1B0GUJ8 204 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 A0A1W2PQU0 124 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 CAPN5O15484 640 aaPredicted RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 PLRG1O43660 514 aaKnown RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 ETHE1O95571 254 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 DBTP11182 482 aaKnown RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 HOXB6P17509 224 aaKnown RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 EFNA1P20827 205 aaPredicted RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 MRPS21P82921 87 aaKnown RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 MLLT1Q03111 559 aaPredicted RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 DOC2AQ14183 400 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 ADAMTSL4Q6UY14 1074 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 VN1R5Q7Z5H4 357 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 L3MBTL4Q8NA19 623 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 OR2L2Q8NH16 312 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 NEIL2Q969S2 332 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 FAM162AQ96A26 154 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 MRGPRX1Q96LB2 322 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 MTERF1Q99551 399 aaKnown RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 RHNO1Q9BSD3 238 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 IRF2BPLQ9H1B7 796 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 SPNS1Q9H2V7 528 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 AASSQ9UDR5 926 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D3DA0A087WVF3 549 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D3IA0A087WXS9 549 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D3EA0A087X179 549 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D3KA0A087X1G2 549 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D3FA6NER0 549 aaPredicted RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D3LB9A6J9 549 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 LOC110117498-PIK3R3F6TDL0 507 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 CATP04040 527 aaKnown RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D3HP0C7X1 549 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 IL9P15248 144 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 LIPAP38571 399 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 GTF2H3Q13889 308 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D3GQ6DHY5 549 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D3CQ6IPX1 549 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 PTCRAQ6ISU1 281 aaPredicted RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 METTL2BQ6P1Q9 378 aaKnown RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 SHQ1Q6PI26 577 aaKnown RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 TBC1D3Q8IZP1 549 aaPredicted RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 TCAIMQ8N3R3 496 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 PSD4Q8NDX1 1056 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 PIK3R3Q92569 461 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 TTC9Q92623 222 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 LINC00615Q96LM1 132 aaPredicted RBP17.76■□□□□ 0.43
SNX11-201ENST00000359238 GABARAPL1Q9H0R8 117 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 LRTM1Q9HBL6 345 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 RNF6Q9Y252 685 aa17.76■□□□□ 0.43
SNX11-201ENST00000359238 TCRBV21S2A2A0A5A6 115 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 CXCR6O00574 342 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 SEMA3DO95025 777 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 NDUFV2P19404 249 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 RRM2P31350 389 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 CTSKP43235 329 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 TBPL1P62380 186 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 MEF2AQ02078 507 aaPredicted RBP17.75■□□□□ 0.43
SNX11-201ENST00000359238 GPR50Q13585 617 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 DDX39BQ13838 428 aaKnown RBP17.75■□□□□ 0.43
SNX11-201ENST00000359238 SIM2Q14190 667 aaPredicted RBP17.75■□□□□ 0.43
SNX11-201ENST00000359238 XKR6Q5GH73 641 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 GALNT5Q7Z7M9 940 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 CYP4Z1Q86W10 505 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 OR56A3Q8NH54 315 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 JPH3Q8WXH2 748 aaPredicted RBP17.75■□□□□ 0.43
SNX11-201ENST00000359238 RIBC2Q9H4K1 309 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 BOLA1Q9Y3E2 137 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 GMPPBQ9Y5P6 360 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 RGS14O43566 566 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 SSX4O60224 188 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 RNGTTO60942 597 aaKnown RBP17.75■□□□□ 0.43
SNX11-201ENST00000359238 C1QCP02747 245 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 RETP07949 1114 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 SRFP11831 508 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 IFNA8P32881 189 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 GNPDA1P46926 289 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 RPS21P63220 83 aaKnown RBP17.75■□□□□ 0.43
SNX11-201ENST00000359238 TDGQ13569 410 aa17.75■□□□□ 0.43
SNX11-201ENST00000359238 MAD2L1BPQ15013 274 aaPredicted RBP17.75■□□□□ 0.43
SNX11-201ENST00000359238 YIF1BQ5BJH7 314 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms