RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GTF2F2P13984 249 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 RAB11BQ15907 218 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 LRRC37A5PQ49AS3 106 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 UNC50Q53HI1 259 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 SIAH1Q8IUQ4 282 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 FOXRED2Q8IWF2 684 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 B3GNT4Q9C0J1 378 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 ATG10Q9H0Y0 220 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 DNTTIP1Q9H147 329 aa5.86□□□□□ -1.47
VPS13B-203ENST00000358544 CLUP10909 449 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 FDXRP22570 491 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 DLSTP36957 453 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 BAG6P46379 1132 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 MED27Q6P2C8 311 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 LRRC70Q7Z2Q7 622 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 NR4A3Q92570 626 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ATP13A2Q9NQ11 1180 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 KCTD3Q9Y597 815 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CHRNA5P30532 468 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 INHBEP58166 350 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 NFKB2Q00653 900 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 FCN2Q15485 313 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 PROX2Q3B8N5 592 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 MAVSQ7Z434 540 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TAC4Q86UU9 113 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TRAPPC5Q8IUR0 188 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZDHHC14Q8IZN3 488 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OR8S1Q8NH09 359 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OSMRQ99650 979 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF649Q9BS31 505 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TGIF2Q9GZN2 237 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 KCNH6Q9H252 994 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 RAI2Q9Y5P3 530 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 MYOM1P52179 1685 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 LOC105369274A0A096LPK9 316 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TRAV19A0A0A6YYK7 116 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 JRKO75564 520 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 B3GAT3O94766 335 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 UBXN7O94888 489 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OAZ2O95190 189 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 SLC25A27O95847 323 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF26P17031 533 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 KCNC1P48547 511 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 LUMP51884 338 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 POU6F2P78424 691 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 HTRA4P83105 476 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ADPRMQ3LIE5 342 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 C6orf136Q5SQH8 315 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF678Q5SXM1 525 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 VTCN1Q7Z7D3 282 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 APOBEC3FQ8IUX4 373 aaKnown RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OR4N4Q8N0Y3 316 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 SLC5A8Q8N695 610 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CLCC1Q96S66 551 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TUT1Q9H6E5 874 aaKnown RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZDHHC6Q9H6R6 413 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ACOT13Q9NPJ3 140 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TEX10Q9NXF1 929 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 MEGF6O75095 1541 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 UNCXA6NJT0 531 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TPST2O60704 377 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 LGALS2P05162 132 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ART1P52961 327 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CRYZQ08257 329 aaKnown RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF155Q12901 538 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 DUSP4Q13115 394 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 EIF4HQ15056 248 aaKnown RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TAF1AQ15573 450 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 DALRD3Q5D0E6 543 aaKnown RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 FAM182AQ5T1J6 154 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CDK15Q96Q40 435 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 MYNNQ9NPC7 610 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 DIP2CQ9Y2E4 1556 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CBY1Q9Y3M2 126 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TARBP1Q13395 1621 aaKnown RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ERAL1O75616 437 aaKnown RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CDK1P06493 297 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 GNALP38405 381 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ARL4DP49703 201 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 PNLIPRP1P54315 467 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 PARP15Q460N3 678 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 GLB1LQ6UWU2 654 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 PGAP1Q75T13 922 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 GALNTL5Q7Z4T8 443 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CILP2Q8IUL8 1156 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 C1orf127Q8N9H9 656 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ADAMTS19Q8TE59 1207 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TIFAQ96CG3 184 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CMTM7Q96FZ5 175 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OR14A2Q96R54 314 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TTPALQ9BTX7 342 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 HES2Q9Y543 173 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 DNMT3AQ9Y6K1 912 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 PHF3Q92576 2039 aaKnown RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 LOC102723532A0A0G2JNH3 316 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ADAMTS3O15072 1205 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 RETP07949 1114 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 DCTP40126 519 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 FXYD6P3P58550 94 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 POU4F2Q12837 409 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms