RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 FKBP10Q96AY3 582 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 TBC1D20Q96BZ9 403 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 NAF1Q96HR8 494 aaKnown RBP14.02□□□□□ -0.16
CCNE1-202ENST00000357943 SPSB2Q99619 263 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 SIKE1Q9BRV8 207 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 SLC26A1Q9H2B4 701 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 SOX17Q9H6I2 414 aaPredicted RBP14.02□□□□□ -0.16
CCNE1-202ENST00000357943 TCF7L2Q9NQB0 619 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 WDR70Q9NW82 654 aa14.02□□□□□ -0.16
CCNE1-202ENST00000357943 LYARQ9NX58 379 aaKnown RBP14.02□□□□□ -0.16
CCNE1-202ENST00000357943 GPN3Q9UHW5 284 aaPredicted RBP14.02□□□□□ -0.16
CCNE1-202ENST00000357943 VSTM2BA6NLU5 285 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 E9PBE3 544 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 PSMD12O00232 456 aaPredicted RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 TERTO14746 1132 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 KLHL41O60662 606 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 FHP07954 510 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 IL3P08700 152 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 G6PDP11413 515 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 DLSTP36957 453 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 EFNA3P52797 238 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 PCBP4P57723 403 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 TNFRSF17Q02223 184 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 MAD2L1Q13257 205 aaPredicted RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 PTGR1Q14914 329 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 SMU1Q2TAY7 513 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 NDUFAF5Q5TEU4 345 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 OGFOD2Q6N063 350 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 ACAD11Q709F0 780 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 LIX1Q8N485 282 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 ENDOVQ8N8Q3 282 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 CLHC1Q8NHS4 586 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 CDC26Q8NHZ8 85 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 MIEF2Q96C03 454 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 TSSK3Q96PN8 268 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 TMEM120AQ9BXJ8 343 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 TGIF2Q9GZN2 237 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 CCDC86Q9H6F5 360 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 LANCL2Q9NS86 450 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 MS4A12Q9NXJ0 267 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 NOP53Q9NZM5 478 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 KLHL14Q9P2G3 628 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 PHF11Q9UIL8 331 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 GLOD5A6NK44 160 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 WASHC1A8K0Z3 465 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 B4GALT2O60909 372 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 KLF7O75840 302 aaPredicted RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 AIFM1O95831 613 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 ACPPP15309 386 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 BUD31P41223 144 aaPredicted RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 ARFIP2P53365 341 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 RPS18P62269 152 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 TRA2BP62995 288 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 MC1RQ01726 317 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 KLC1Q07866 573 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 CLN3Q13286 438 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 MINDY4Q4G0A6 757 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 CLNKQ7Z7G1 428 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 CPLX4Q7Z7G2 160 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 SLC45A3Q96JT2 553 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 MARK4Q96L34 752 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 OR1F2PQ96R84 312 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 ELAC2Q9BQ52 826 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 CCDC28BQ9BUN5 200 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 DKK4Q9UBT3 224 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 G3BP2Q9UN86 482 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 EIF3LQ9Y262 564 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 FARSAQ9Y285 508 aaKnown RBP14.01□□□□□ -0.17
CCNE1-202ENST00000357943 SPACA6W5XKT8 324 aa14.01□□□□□ -0.17
CCNE1-202ENST00000357943 C21orf140B9A014 251 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 FAM107AO95990 144 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 CAPNS1P04632 268 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 RAB40ALP0C0E4 278 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 MAPK1P28482 360 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 SRSF6Q13247 344 aaKnown RBP14□□□□□ -0.17
CCNE1-202ENST00000357943 DNASE1L3Q13609 305 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 TMEM132CQ8N3T6 1108 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 BCAS4Q8TDM0 211 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 C10orf82Q8WW14 230 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 GFM2Q969S9 779 aaKnown RBP14□□□□□ -0.17
CCNE1-202ENST00000357943 RILPQ96NA2 401 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 CCT8L2Q96SF2 557 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 NSRP1Q9H0G5 558 aaKnown RBP14□□□□□ -0.17
CCNE1-202ENST00000357943 RPF2Q9H7B2 306 aaKnown RBP14□□□□□ -0.17
CCNE1-202ENST00000357943 WDR54Q9H977 334 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 C14orf105Q9NVL8 296 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 ASIC5Q9NY37 505 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 C5AR2Q9P296 337 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 HEY2Q9UBP5 337 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 IL17BQ9UHF5 180 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 MKL2Q9ULH7 1088 aa14□□□□□ -0.17
CCNE1-202ENST00000357943 EXO1Q9UQ84 846 aaKnown RBP14□□□□□ -0.17
CCNE1-202ENST00000357943 MRPS18BQ9Y676 258 aaKnown RBP14□□□□□ -0.17
CCNE1-202ENST00000357943 C1QTNF9BB2RNN3 333 aa13.99□□□□□ -0.17
CCNE1-202ENST00000357943 PGRMC2O15173 223 aa13.99□□□□□ -0.17
CCNE1-202ENST00000357943 UBDO15205 165 aa13.99□□□□□ -0.17
CCNE1-202ENST00000357943 GUCY1B2O75343 617 aa13.99□□□□□ -0.17
CCNE1-202ENST00000357943 LRATO95237 230 aa13.99□□□□□ -0.17
CCNE1-202ENST00000357943 RECKO95980 971 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms