RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 PAK4O96013 591 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D3HP0C7X1 549 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 GPR89BP0CG08 455 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 MPC1LP0DKB6 136 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 THRBP10828 461 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 ACSL1P33121 698 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 RGS4P49798 205 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 ARHGDIBP52566 201 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 ADARB1P78563 741 aaKnown RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SGCGQ13326 291 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 UBXN2BQ14CS0 331 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TSNQ15631 228 aaKnown RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D3GQ6DHY5 549 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D3CQ6IPX1 549 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SBSNQ6UWP8 590 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF547Q8IVP9 402 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D3Q8IZP1 549 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 DENND6BQ8NEG7 585 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 HMGB4Q8WW32 186 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 RNF170Q96K19 258 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 CHCHD6Q9BRQ6 235 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 CD320Q9NPF0 282 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 GULP1Q9UBP9 304 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 NUP50Q9UKX7 468 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 PCDHGA9Q9Y5G4 932 aaKnown RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 PIKFYVEQ9Y2I7 2098 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 SLC5A10A0PJK1 596 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 NPEPPSL1A6NEC2 478 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 MT-ND2P03891 347 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 PCCBP05166 539 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF8P17098 575 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-203ENST00000354674 CAPZA2P47755 286 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 MAP2K6P52564 334 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 ARSFP54793 590 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 FAPQ12884 760 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 KCNAB2Q13303 367 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 SPANXN2Q5MJ10 180 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 TYW3Q6IPR3 259 aaKnown RBP9.66□□□□□ -0.86
SYNE1-203ENST00000354674 TMEM220Q6QAJ8 160 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 PIWIL4Q7Z3Z4 852 aaKnown RBP9.66□□□□□ -0.86
SYNE1-203ENST00000354674 ABI3BPQ7Z7G0 1075 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 PJA1Q8NG27 643 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 LHFPL5Q8TAF8 219 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 C12orf57Q99622 126 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 LGR4Q9BXB1 951 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 C1QTNF3Q9BXJ4 246 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 BTBD1Q9H0C5 482 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 OR2AG1Q9H205 316 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 IFT22Q9H7X7 185 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D17Q9HA65 648 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 TMEM181Q9P2C4 612 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 RAP2CQ9Y3L5 183 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 KCNE2Q9Y6J6 123 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 TRPM6Q9BX84 2022 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 C17orf113A0A1B0GUU1 675 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 PIPSLA2A3N6 862 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 TRIM64A6NGJ6 449 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 OR2AG2A6NM03 316 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 SLC1A7O00341 560 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 BTN3A1O00481 513 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 NPHS1O60500 1241 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 DNAJB5O75953 348 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 CDK14O94921 469 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 ADORA3P0DMS8 318 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 IMPDH1P20839 514 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 SSTR2P30874 369 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 IGFALSP35858 605 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 HK3P52790 923 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 NFE2L1Q14494 772 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF181Q2M3W8 571 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 TMEM81Q6P7N7 255 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 AHSA2Q719I0 299 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 C11orf96Q7Z7L8 435 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF540Q8NDQ6 660 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 TRPV3Q8NET8 790 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 FBXO30Q8TB52 745 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 TMEM80Q96HE8 168 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 ASB2Q96Q27 587 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 AMBRA1Q9C0C7 1298 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 TINAGL1Q9GZM7 467 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-203ENST00000354674 RDH14Q9HBH5 336 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 CD300AQ9UGN4 299 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 PRKAB1Q9Y478 270 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 CLCA3PQ9Y6N3 262 aa9.66□□□□□ -0.86
SYNE1-203ENST00000354674 LRRC72A6NJI9 287 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 UBXN8O00124 270 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 SDHDO14521 159 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 MED26O95402 600 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 PAHP00439 452 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 CLCA4Q14CN2 919 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 CHMP1BQ7LBR1 199 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 SAMD14Q8IZD0 417 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-203ENST00000354674 SPEM1Q8N4L4 309 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 SCARF2Q96GP6 870 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-203ENST00000354674 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.65□□□□□ -0.86
SYNE1-203ENST00000354674 OARD1Q9Y530 152 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 TRBV23-1A0A0A0MS06 115 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 A0A1W2PRG6 482 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 TMEM202A6NGA9 273 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms