RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 RGS14O43566 566 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 TMPRSS11DO60235 418 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 PRMT3O60678 531 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 RSL1D1O76021 490 aaKnown RBP13.12□□□□□ -0.31
SEC13-202ENST00000350697 GBAP04062 536 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 ITGB2P05107 769 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 FAM58BPP0C7Q3 252 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 C8orf89P0DMQ9 161 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 ACPPP15309 386 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 CPN2P22792 545 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 TPP2P29144 1249 aaPredicted RBP13.12□□□□□ -0.31
SEC13-202ENST00000350697 TLX1P31314 330 aaPredicted RBP13.12□□□□□ -0.31
SEC13-202ENST00000350697 HSD17B7P56937 341 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 RHAGQ02094 409 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 ATP1A4Q13733 1029 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 FAAH2Q6GMR7 532 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 KIRREL2Q6UWL6 708 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 DDIASQ8IXT1 998 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 METTL2AQ96IZ6 378 aaKnown RBP13.12□□□□□ -0.31
SEC13-202ENST00000350697 CSF3RQ99062 836 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 SORT1Q99523 831 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 CCT7Q99832 543 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 TUBB1Q9H4B7 451 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 PRDM9Q9NQV7 894 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 INTS9Q9NV88 658 aaKnown RBP13.12□□□□□ -0.31
SEC13-202ENST00000350697 THAP1Q9NVV9 213 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 P4HTMQ9NXG6 502 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 C19orf25Q9UFG5 118 aaPredicted RBP13.12□□□□□ -0.31
SEC13-202ENST00000350697 HAO1Q9UJM8 370 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 CCL27Q9Y4X3 112 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 ASB4Q9Y574 426 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 KMT2BQ9UMN6 2715 aaPredicted RBP13.12□□□□□ -0.31
SEC13-202ENST00000350697 LOC400499M0QZD8 3231 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 A0A1W2PQ72 361 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 NPIPB8E9PQR5 432 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 PIP5K1BO14986 540 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 PROM1O43490 865 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 SNNO75324 88 aaPredicted RBP13.11□□□□□ -0.31
SEC13-202ENST00000350697 GUCY1B2O75343 617 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 LINC00032P0C843 101 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 PRPH2P23942 346 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 BUD31P41223 144 aaPredicted RBP13.11□□□□□ -0.31
SEC13-202ENST00000350697 RPL14P50914 215 aaKnown RBP13.11□□□□□ -0.31
SEC13-202ENST00000350697 MAPK12P53778 367 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 RRADP55042 308 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 HNRNPH2P55795 449 aaKnown RBP13.11□□□□□ -0.31
SEC13-202ENST00000350697 BTG2P78543 158 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 RHDQ02161 417 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 TNFRSF17Q02223 184 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 BTKQ06187 659 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 SLC13A2Q13183 592 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 NSDHLQ15738 373 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 GALNT18Q6P9A2 607 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 BORAQ6PGQ7 559 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 Q6ZSR9 355 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 ZNF781Q8N8C0 355 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 TMEM102Q8N9M5 508 aaPredicted RBP13.11□□□□□ -0.31
SEC13-202ENST00000350697 TMEM52Q8NDY8 209 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 OR11G2Q8NGC1 345 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 C8orf44Q96CB5 159 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 C11orf24Q96F05 449 aaPredicted RBP13.11□□□□□ -0.31
SEC13-202ENST00000350697 APIPQ96GX9 242 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 FER1L6-AS2Q96M78 137 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 PTCHD1Q96NR3 888 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 PFDN4Q9NQP4 134 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 PRTFDC1Q9NRG1 225 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 SIRT5Q9NXA8 310 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 MCM8Q9UJA3 840 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 ATG4BQ9Y4P1 393 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 PTGDR2Q9Y5Y4 395 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 KCNMB2Q9Y691 235 aa13.11□□□□□ -0.31
SEC13-202ENST00000350697 MED13Q9UHV7 2174 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 LOC102723996A0A087X1L8 192 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 IGKV3D-11A0A0A0MRZ8 115 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 ARGFXA6NJG6 315 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 PCDH7O60245 1069 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 SHOX2O60902 331 aaPredicted RBP13.1□□□□□ -0.31
SEC13-202ENST00000350697 CTNSO60931 367 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 NR2F6P10588 404 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 MAOAP21397 527 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 TIA1P31483 386 aaKnown RBP eCLIP13.1□□□□□ -0.31
SEC13-202ENST00000350697 HNRNPFP52597 415 aaKnown RBP13.1□□□□□ -0.31
SEC13-202ENST00000350697 NR6A1Q15406 480 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 TBR1Q16650 682 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 LANCL3Q6ZV70 420 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 ANKRD37Q7Z713 158 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 APLFQ8IW19 511 aaPredicted RBP13.1□□□□□ -0.31
SEC13-202ENST00000350697 SCUBE1Q8IWY4 988 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 APOBEC4Q8WW27 367 aaKnown RBP13.1□□□□□ -0.31
SEC13-202ENST00000350697 DYDC1Q8WWB3 177 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 ZNF75CPQ92670 426 aaPredicted RBP13.1□□□□□ -0.31
SEC13-202ENST00000350697 TSLPQ969D9 159 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 MESP1Q9BRJ9 268 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 RPF2Q9H7B2 306 aaKnown RBP13.1□□□□□ -0.31
SEC13-202ENST00000350697 WDR41Q9HAD4 459 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 C1orf109Q9NX04 203 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 FBXL4Q9UKA2 621 aa13.1□□□□□ -0.31
SEC13-202ENST00000350697 PCSK5Q92824 1860 aa13.09□□□□□ -0.31
SEC13-202ENST00000350697 GNG14A0A1W2PPG7 69 aa13.09□□□□□ -0.31
SEC13-202ENST00000350697 A0A1W2PR48 441 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms