RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SLAMF7Q9NQ25 335 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 EHD3Q9NZN3 535 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 KIF17Q9P2E2 1029 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 PLXND1Q9Y4D7 1925 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 TNFRSF10CO14798 259 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 GUCY1B2O75343 617 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 CPNE6O95741 557 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 OPN1SWP03999 348 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 HNRNPA2B1P22626 353 aaKnown RBP15.87■□□□□ 0.13
SAMM50-201ENST00000350028 RRM2P31350 389 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 SLC5A2P31639 672 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 POLR2IP36954 125 aaKnown RBP15.87■□□□□ 0.13
SAMM50-201ENST00000350028 PLA2G16P53816 162 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 PMS2P3Q13401 168 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 LAPTM4AQ15012 233 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 CTU2Q2VPK5 515 aaKnown RBP15.87■□□□□ 0.13
SAMM50-201ENST00000350028 REEP3Q6NUK4 255 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 TSEN54Q7Z6J9 526 aaKnown RBP15.87■□□□□ 0.13
SAMM50-201ENST00000350028 CLVS1Q8IUQ0 354 aaPredicted RBP15.87■□□□□ 0.13
SAMM50-201ENST00000350028 ERI1Q8IV48 349 aaKnown RBP15.87■□□□□ 0.13
SAMM50-201ENST00000350028 ATG16L2Q8NAA4 619 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 SMRP1Q8NCR6 262 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 SRFBP1Q8NEF9 429 aaKnown RBP15.87■□□□□ 0.13
SAMM50-201ENST00000350028 DNASE1L2Q92874 299 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 EXOSC8Q96B26 276 aaKnown RBP15.87■□□□□ 0.13
SAMM50-201ENST00000350028 BMFQ96LC9 184 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 TEFMQ96QE5 360 aaKnown RBP15.87■□□□□ 0.13
SAMM50-201ENST00000350028 DPH7Q9BTV6 452 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 ABCG4Q9H172 646 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 CXorf21Q9HAI6 301 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 A4GALTQ9NPC4 353 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 KRT84Q9NSB2 600 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 TEX10Q9NXF1 929 aaPredicted RBP15.87■□□□□ 0.13
SAMM50-201ENST00000350028 OR6C2Q9NZP2 312 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 NDUFAF4Q9P032 175 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 PCOLCE2Q9UKZ9 415 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 MTCH2Q9Y6C9 303 aa15.87■□□□□ 0.13
SAMM50-201ENST00000350028 PRAMEF33A0A0G2JMD5 474 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 LRRC72A6NJI9 287 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 HAT1O14929 419 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 TRMUO75648 421 aaKnown RBP15.86■□□□□ 0.13
SAMM50-201ENST00000350028 CCDC159P0C7I6 412 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 IL7RP16871 459 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 PEBP1P30086 187 aaKnown RBP15.86■□□□□ 0.13
SAMM50-201ENST00000350028 IL1RL1Q01638 556 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 CDK5R2Q13319 367 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 SLC9A5Q14940 896 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 RAB39AQ14964 217 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 SPDYE7PQ495Y7 208 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 CEACAM20Q6UY09 585 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 C6orf120Q7Z4R8 191 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 AMIGO1Q86WK6 493 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 AMER3Q8N944 861 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 TTC29Q8NA56 475 aaPredicted RBP15.86■□□□□ 0.13
SAMM50-201ENST00000350028 MFSD9Q8NBP5 474 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 TMEM145Q8NBT3 493 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 PSMA8Q8TAA3 256 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 ZNF420Q8TAQ5 688 aaPredicted RBP15.86■□□□□ 0.13
SAMM50-201ENST00000350028 GEMIN6Q8WXD5 167 aaKnown RBP15.86■□□□□ 0.13
SAMM50-201ENST00000350028 ZNF566Q969W8 418 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 MS4A6EQ96DS6 147 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 ZNF300Q96RE9 604 aaPredicted RBP15.86■□□□□ 0.13
SAMM50-201ENST00000350028 APOL4Q9BPW4 351 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 C17orf62Q9BQA9 187 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 TMEM121BQ9BXQ6 578 aaPredicted RBP15.86■□□□□ 0.13
SAMM50-201ENST00000350028 AICDAQ9GZX7 198 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 SIRT3Q9NTG7 399 aaPredicted RBP15.86■□□□□ 0.13
SAMM50-201ENST00000350028 ZSCAN32Q9NX65 697 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 SPHK1Q9NYA1 384 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 TBC1D29Q9UFV1 150 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 BRWD1Q9NSI6 2320 aa15.86■□□□□ 0.13
SAMM50-201ENST00000350028 ISM1B1AKI9 464 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 C5orf58C9J3I9 102 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 TNFRSF11BO00300 401 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 SCAMP1O15126 338 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 B4GAT1O43505 415 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 NDUFV2P19404 249 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 ACSL1P33121 698 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 CLK3P49761 638 aaKnown RBP15.85■□□□□ 0.13
SAMM50-201ENST00000350028 YPEL5P62699 121 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 IL5RAQ01344 420 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 HYAL2Q12891 473 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 RAPSNQ13702 412 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 FBXO43Q4G163 708 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 PRPF38BQ5VTL8 546 aaKnown RBP15.85■□□□□ 0.13
SAMM50-201ENST00000350028 ZNF425Q6IV72 752 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 HORMAD2Q8N7B1 307 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 GIPC3Q8TF64 312 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 LCN9Q8WX39 176 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 KLHL31Q9H511 634 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 GMPPBQ9Y5P6 360 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 LYVE1Q9Y5Y7 322 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 CHRM5P08912 532 aaPredicted RBP15.85■□□□□ 0.13
SAMM50-201ENST00000350028 TSFMP43897 325 aaKnown RBP15.85■□□□□ 0.13
SAMM50-201ENST00000350028 HSPB3Q12988 150 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 TUBA3CQ13748 450 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 SIM2Q14190 667 aaPredicted RBP15.85■□□□□ 0.13
SAMM50-201ENST00000350028 TOR1AIP1Q5JTV8 583 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 NDUFAF5Q5TEU4 345 aa15.85■□□□□ 0.13
SAMM50-201ENST00000350028 MRM1Q6IN84 353 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms