RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 LRRN3Q9H3W5 708 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 C8orf33Q9H7E9 229 aaPredicted RBP22.23■■□□□ 1.15
NPAS3-201ENST00000346562 A0A1W2PP55 124 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 EMC8O43402 210 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 GRIA2P42262 883 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 MEF2AQ02078 507 aaPredicted RBP22.23■■□□□ 1.15
NPAS3-201ENST00000346562 MPP2Q14168 576 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 TRIM74Q86UV6 250 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 ZNF285Q96NJ3 590 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 PLD2O14939 933 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 PGCP20142 388 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 ZNF572Q7Z3I7 529 aaPredicted RBP22.23■■□□□ 1.15
NPAS3-201ENST00000346562 FCAMRQ8WWV6 532 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 GLYATL1Q969I3 302 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 GPR174Q9BXC1 333 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 TOR3AQ9H497 397 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 GSKIPQ9P0R6 139 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 IL3P08700 152 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 GSTM4Q03013 218 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 SLC39A4Q6P5W5 647 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 ERI1Q8IV48 349 aaKnown RBP22.23■■□□□ 1.15
NPAS3-201ENST00000346562 NUP43Q8NFH3 380 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 XKR8Q9H6D3 395 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 DHDHQ9UQ10 334 aa22.23■■□□□ 1.15
NPAS3-201ENST00000346562 OR6C70A6NIJ9 312 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 RPS15P62841 145 aaKnown RBP22.22■■□□□ 1.15
NPAS3-201ENST00000346562 ACTC1P68032 377 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 ACTA1P68133 377 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 GALK2Q01415 458 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 ACSBG2Q5FVE4 666 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 RHCGQ9UBD6 479 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 FTSJ1Q9UET6 329 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 SLC7A8Q9UHI5 535 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 A0A0D9SEW6 157 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 FTCDNL1E5RQL4 147 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 FAAHO00519 579 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 CKMT2P17540 419 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 PSMA6P60900 246 aaKnown RBP22.22■■□□□ 1.15
NPAS3-201ENST00000346562 LMAN2Q12907 356 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 TRIM43Q96BQ3 446 aaPredicted RBP22.22■■□□□ 1.15
NPAS3-201ENST00000346562 SPEF1Q9Y4P9 236 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 C1orf226A1L170 272 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 CARD17Q5XLA6 110 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 NEDD4LQ96PU5 975 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 LRRC42Q9Y546 428 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 KDM4FA0A1W2PPD8 638 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 ZNF487B1APH4 448 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 ERMP1Q7Z2K6 904 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 SCGB1C1Q8TD33 95 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 KATNBL1Q9H079 304 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 DNAJC27Q9NZQ0 273 aa22.22■■□□□ 1.15
NPAS3-201ENST00000346562 CDC123O75794 336 aaPredicted RBP22.21■■□□□ 1.15
NPAS3-201ENST00000346562 GSTM2P28161 218 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 CNPY1Q3B7I2 92 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 DCDC5Q6ZRR9 648 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 FTMTQ8N4E7 242 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 SLC37A3Q8NCC5 494 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 PPP1R14BQ96C90 147 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 HSPA12BQ96MM6 686 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 ZNF382Q96SR6 550 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 ERCC1P07992 297 aaPredicted RBP22.21■■□□□ 1.15
NPAS3-201ENST00000346562 GKN3PP0CG01 181 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 JUNDP17535 347 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 CD9P21926 228 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 ANKDD1AQ495B1 522 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 SLC35F1Q5T1Q4 408 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 RAET1LQ5VY80 246 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 Q6ZVL8 140 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 GATSQ8NAP1 163 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 C1orf21Q9H246 121 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 RNF6Q9Y252 685 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 KCNIP3Q9Y2W7 256 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 ACOT7O00154 380 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 IFNA2P01563 188 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 CFHP08603 1231 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 CREB1P16220 341 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 GKP32189 559 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 ASTE1Q2TB18 679 aaPredicted RBP22.21■■□□□ 1.15
NPAS3-201ENST00000346562 CCDC116Q8IYX3 515 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 LRRC25Q8N386 305 aaPredicted RBP22.21■■□□□ 1.15
NPAS3-201ENST00000346562 KCNA7Q96RP8 456 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 HERC2P3Q9BVR0 1158 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 TEX264Q9Y6I9 313 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 ZNF860A6NHJ4 632 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 PIRO00625 290 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 NPC1O15118 1278 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 OR12D1P0DN82 309 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 POU4F2Q12837 409 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 UPP1Q16831 310 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 SMAD9O15198 467 aaKnown RBP22.21■■□□□ 1.15
NPAS3-201ENST00000346562 BCAS2O75934 225 aaPredicted RBP22.21■■□□□ 1.15
NPAS3-201ENST00000346562 CD3GP09693 182 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 DLX2Q07687 328 aaPredicted RBP22.21■■□□□ 1.15
NPAS3-201ENST00000346562 ZNF517Q6ZMY9 492 aaPredicted RBP22.21■■□□□ 1.15
NPAS3-201ENST00000346562 ZNF440Q8IYI8 595 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 MROQ9BYG7 248 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 ENAMQ9NRM1 1142 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 ZNF451Q9Y4E5 1061 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 PCDHGA6Q9Y5G7 932 aa22.21■■□□□ 1.15
NPAS3-201ENST00000346562 NECTIN4Q96NY8 510 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms