RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PEAK1Q9H792 1746 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 SPATA31A5Q5VU36 1347 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 SPATA31A7Q8IWB4 1347 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 ATP6V1G2-DDX39BF2Z307 99 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 ALDH3B1P43353 468 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 NOXA1Q86UR1 476 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 PMM1Q92871 262 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 WRAP53Q9BUR4 548 aaKnown RBP18.68■□□□□ 0.58
HDAC4-201ENST00000345617 GMDSO60547 372 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 ZNF30P17039 623 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 APOBEC3HQ6NTF7 200 aaKnown RBP18.68■□□□□ 0.58
HDAC4-201ENST00000345617 TMEM220Q6QAJ8 160 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 CATSPERGQ6ZRH7 1159 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 AOC2O75106 756 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 CHATP28329 748 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 TMEM198Q66K66 360 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 PYROXD2Q8N2H3 581 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 PHTF2Q8N3S3 785 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 WNT9AO14904 365 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 ZDHHC14Q8IZN3 488 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 CCM2Q9BSQ5 444 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 MIR1-1HGQ9H1L0 117 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 SCN3AQ9NY46 2000 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 CACNA1SQ13698 1873 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 KRBOX1C9JBD0 128 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 PRAMEF2O60811 474 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 ZNF280BQ86YH2 543 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 OR10T2Q8NGX3 314 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 HOXB13Q92826 284 aaPredicted RBP18.67■□□□□ 0.58
HDAC4-201ENST00000345617 GAL3ST1Q99999 423 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 NPLQ9BXD5 320 aaPredicted RBP18.67■□□□□ 0.58
HDAC4-201ENST00000345617 ST14Q9Y5Y6 855 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 MAFKO60675 156 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 RFPL3O75679 317 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 C6orf141Q5SZD1 244 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 NAT16Q8N8M0 369 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 CASTOR1Q8WTX7 329 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 IRS2Q9Y4H2 1338 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 SEC14L2O76054 403 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 TRIM23P36406 574 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 TRMT10BQ6PF06 316 aaKnown RBP18.67■□□□□ 0.58
HDAC4-201ENST00000345617 TMEM100Q9NV29 134 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 VNN3Q9NY84 501 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 SLC27A5Q9Y2P5 690 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 CDK1P06493 297 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 UCHL1P09936 223 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 JSRP1Q96MG2 331 aaPredicted RBP18.67■□□□□ 0.58
HDAC4-201ENST00000345617 CRTAC1Q9NQ79 661 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 ZDHHC2Q9UIJ5 367 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 CKAP5Q14008 2032 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 MC2RQ01718 297 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 ATXN7L3Q14CW9 347 aaPredicted RBP18.67■□□□□ 0.58
HDAC4-201ENST00000345617 PTPRRQ15256 657 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 RTL6Q6ICC9 239 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 CHST9Q7L1S5 443 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 RNF130Q86XS8 419 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 CHDHQ8NE62 594 aaPredicted RBP18.67■□□□□ 0.58
HDAC4-201ENST00000345617 SUN3Q8TAQ9 357 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 TMEM234Q8WY98 164 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 PPIL3Q9H2H8 161 aaKnown RBP18.67■□□□□ 0.58
HDAC4-201ENST00000345617 GLTPQ9NZD2 209 aa18.67■□□□□ 0.58
HDAC4-201ENST00000345617 CHRM5P08912 532 aaPredicted RBP18.66■□□□□ 0.58
HDAC4-201ENST00000345617 PRKACBP22694 351 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 IDH3GP51553 393 aaPredicted RBP18.66■□□□□ 0.58
HDAC4-201ENST00000345617 TAS2R20P59543 309 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 NTRK2Q16620 822 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 INAVAQ3KP66 663 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 ZNF366Q8N895 744 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 PCDH17O14917 1159 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 ZNF821O75541 412 aaPredicted RBP18.66■□□□□ 0.58
HDAC4-201ENST00000345617 ZDHHC24Q6UX98 284 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 RHEBL1Q8TAI7 183 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 APC2O95996 2303 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 MDFIC2A0A1B0GVS7 189 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 A8MVJ9 347 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 CDC7O00311 574 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 ERVK-21P61565 698 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 GPC2Q8N158 579 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 VWA5B2Q8N398 1253 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 SLC35B2Q8TB61 432 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 ADAM10O14672 748 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 GP1BBP13224 206 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 EIF4HQ15056 248 aaKnown RBP18.66■□□□□ 0.58
HDAC4-201ENST00000345617 PFKLP17858 780 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 CD34P28906 385 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 ABHD15Q6UXT9 468 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 GON7Q9BXV9 100 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 OR51I1Q9H343 314 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 EFCAB7A8K855 629 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 BHMG1C9JSJ3 638 aaPredicted RBP18.66■□□□□ 0.58
HDAC4-201ENST00000345617 ALPPL2P10696 532 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 ELK4P28324 431 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 SPOCK1Q08629 439 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 LAMB4A4D0S4 1761 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 PGM2L1Q6PCE3 622 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 KCNIP4Q6PIL6 250 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 FAM110BQ8TC76 370 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 SLC25A36Q96CQ1 311 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 SNX27Q96L92 541 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 OSBPL2Q9H1P3 480 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms