RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GFRA2O00451 464 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 HCN1O60741 890 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 PIM1P11309 404 aaPredicted RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 PDHA2P29803 388 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 HBA1P69905 142 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 TGM3Q08188 693 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 RSPO2Q6UXX9 243 aaPredicted RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 CXXC5Q7LFL8 322 aaKnown RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 OLIG3Q7RTU3 272 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 AMZ2Q86W34 360 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 WFDC5Q8TCV5 224 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 OR8D1Q8WZ84 308 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 SMG7Q92540 1137 aaKnown RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 NMNAT1Q9HAN9 279 aaPredicted RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 C3orf14Q9HBI5 128 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 DEC1Q9P2X7 70 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 CMAHPQ9Y471 501 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 TRIM64CA6NLI5 447 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 ARHGEF33A8MVX0 844 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 SCAMP2O15127 329 aaKnown RBP11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 GUCY1B2O75343 617 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 ENTPD6O75354 484 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 MASP1P48740 699 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 SPINT3P49223 89 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 CRISP3P54108 245 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 SELENOWP63302 87 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 ID2Q02363 134 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 MAP4K2Q12851 820 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 C2orf15Q8WU43 125 aaKnown RBP11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 SLC5A11Q8WWX8 675 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 WBP2Q969T9 261 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 SCRN2Q96FV2 425 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 ZNF486Q96H40 463 aaPredicted RBP11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 MND1Q9BWT6 205 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 DKK3Q9UBP4 350 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 CD8B2A6NJW9 211 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 PCP4L1A6NKN8 68 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 TTC34A8MYJ7 566 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 RLN1P04808 185 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 MRPL3P09001 348 aaKnown RBP11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 CD8BP10966 210 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 ARPC4P59998 168 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 LIPJQ5W064 366 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 ADNP2Q6IQ32 1131 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 CYHR1Q6ZMK1 362 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 BHLHA9Q7RTU4 235 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 ALDH16A1Q8IZ83 802 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 JPH3Q8WXH2 748 aaPredicted RBP11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 NIPSNAP1Q9BPW8 284 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 SLC12A9Q9BXP2 914 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 LOXHD1Q8IVV2 1947 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 DAPL1A0PJW8 107 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 ISPDA4D126 451 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 LEFTY2O00292 366 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 HLA-DQA2P01906 255 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 CD9P21926 228 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 CTSCP53634 463 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 HOXC5Q00444 222 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 KCNC4Q03721 635 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 SLC5A12Q1EHB4 618 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 KLHL22Q53GT1 634 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 PIGXQ8TBF5 258 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 PPP1R16AQ96I34 528 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 ZNF300Q96RE9 604 aaPredicted RBP11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 NTMT1Q9BV86 223 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 MROQ9BYG7 248 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 CPNE5Q9HCH3 593 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 RLIMQ9NVW2 624 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 VNN3Q9NY84 501 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 KCNK6Q9Y257 313 aa11.9□□□□□ -0.5
SNRNP48-201ENST00000342415 ANHXE9PGG2 379 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 CACNG3O60359 315 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 RPS3P23396 243 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TNFSF8P32971 234 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 CAP1Q01518 475 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 GRSF1Q12849 480 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF311Q5JNZ3 666 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 SNAP47Q5SQN1 464 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 MORN1Q5T089 497 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 ARMC6Q6NXE6 501 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 OOSP2Q86WS3 158 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 Q8N402 240 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF740Q8NDX6 193 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TMEM19Q96HH6 336 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 CSF3RQ99062 836 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 NEURL2Q9BR09 285 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 IFT27Q9BW83 186 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 KATNBL1Q9H079 304 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC45A1Q9Y2W3 748 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 TSPAN4O14817 238 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 KHDRBS3O75525 346 aaKnown RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 KCNK5O95279 499 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 PEX11BO96011 259 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 SRCP12931 536 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 BTBD16Q32M84 506 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 CCSMST1Q4G0I0 132 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 FAM46CQ5VWP2 391 aa11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 PSRC1Q6PGN9 363 aaPredicted RBP11.89□□□□□ -0.51
SNRNP48-201ENST00000342415 C6orf120Q7Z4R8 191 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms