RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 BHLHE22Q8NFJ8 381 aaPredicted RBP16.44■□□□□ 0.22
CLDN4-201ENST00000340958 JADE3Q92613 823 aa16.44■□□□□ 0.22
CLDN4-201ENST00000340958 NAT6Q93015 286 aa16.44■□□□□ 0.22
CLDN4-201ENST00000340958 CCDC115Q96NT0 180 aa16.44■□□□□ 0.22
CLDN4-201ENST00000340958 EDEM2Q9BV94 578 aa16.44■□□□□ 0.22
CLDN4-201ENST00000340958 SLC25A37Q9NYZ2 338 aa16.44■□□□□ 0.22
CLDN4-201ENST00000340958 C5AR2Q9P296 337 aa16.44■□□□□ 0.22
CLDN4-201ENST00000340958 UTS2RQ9UKP6 389 aa16.44■□□□□ 0.22
CLDN4-201ENST00000340958 CLCA2Q9UQC9 943 aa16.44■□□□□ 0.22
CLDN4-201ENST00000340958 ATG4BQ9Y4P1 393 aa16.44■□□□□ 0.22
CLDN4-201ENST00000340958 SPACA6W5XKT8 324 aa16.44■□□□□ 0.22
CLDN4-201ENST00000340958 DNAJA2O60884 412 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 SCN2BO60939 215 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 GMNNO75496 209 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 C6orf47O95873 294 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 IL1RNP18510 177 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 CPN2P22792 545 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 CD1CP29017 333 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 BUD31P41223 144 aaPredicted RBP16.43■□□□□ 0.22
CLDN4-201ENST00000340958 MANFP55145 182 aaKnown RBP16.43■□□□□ 0.22
CLDN4-201ENST00000340958 MS4A2Q01362 244 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 BNIP2Q12982 314 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 SELPLGQ14242 412 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 NDUFA9Q16795 377 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 TMEM214Q6NUQ4 689 aaKnown RBP16.43■□□□□ 0.22
CLDN4-201ENST00000340958 FAM180BQ6P0A1 224 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 SPATA24Q86W54 205 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 FAM181AQ8N9Y4 354 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 FAM47BQ8NA70 645 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 AURKBQ96GD4 344 aaPredicted RBP16.43■□□□□ 0.22
CLDN4-201ENST00000340958 MAPKAP1Q9BPZ7 522 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 TRIM15Q9C019 465 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 ANKHQ9HCJ1 492 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 SLC6A13Q9NSD5 602 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 ZNF282Q9UDV7 671 aaPredicted RBP16.43■□□□□ 0.22
CLDN4-201ENST00000340958 EGFL7Q9UHF1 273 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 ASB4Q9Y574 426 aa16.43■□□□□ 0.22
CLDN4-201ENST00000340958 C1orf226A1L170 272 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 HCRTR1O43613 425 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 PCDHGA12O60330 932 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 ERAL1O75616 437 aaKnown RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 HSD17B1P14061 328 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 TLX1P31314 330 aaPredicted RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 SOAT1P35610 550 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 GSK3BP49841 420 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 HSD11B2P80365 405 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 TRAP1Q12931 704 aaKnown RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 TMTC4Q5T4D3 741 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 WDR74Q6RFH5 385 aaPredicted RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 DHFR2Q86XF0 187 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 MSRB3Q8IXL7 192 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 CARFQ8N187 725 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 OR10A6Q8NH74 314 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 RSRC1Q96IZ7 334 aaKnown RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 GIMAP4Q9NUV9 329 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 TMEM9Q9P0T7 183 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 PHF11Q9UIL8 331 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 NAALAD2Q9Y3Q0 740 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 SNX8Q9Y5X2 465 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 ASCC3Q8N3C0 2202 aaKnown RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 A0A1W2PR48 441 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 ZNF860A6NHJ4 632 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 GSTA4O15217 222 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 PRKRAO75569 313 aaKnown RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 BCAS2O75934 225 aaPredicted RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 PSMG1O95456 288 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 AIFM1O95831 613 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 RPLP0P05388 317 aaKnown RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 SMIM10L1P0DMW3 83 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 NR2F6P10588 404 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 NTSP30990 170 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 DUSP3P51452 185 aaPredicted RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 SKP1P63208 163 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 OLR1P78380 273 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 CCNIQ14094 377 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 C18orf63Q68DL7 685 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 MRM1Q6IN84 353 aaKnown RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 TNIP2Q8NFZ5 429 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 FAM120BQ96EK7 910 aaKnown RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 ZBED6CLQ96FA7 236 aaPredicted RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 SMIM10Q96HG1 83 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 BBS4Q96RK4 519 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 NUDT22Q9BRQ3 303 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 MS4A12Q9NXJ0 267 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 EHD3Q9NZN3 535 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 GMPR2Q9P2T1 348 aaKnown RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 PSME2Q9UL46 239 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 ENTPD4Q9Y227 616 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 MRPS2Q9Y399 296 aaKnown RBP16.42■□□□□ 0.22
CLDN4-201ENST00000340958 SLC22A7Q9Y694 548 aa16.42■□□□□ 0.22
CLDN4-201ENST00000340958 CABIN1Q9Y6J0 2220 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 EME2A4GXA9 379 aaPredicted RBP16.41■□□□□ 0.22
CLDN4-201ENST00000340958 CLIC1O00299 241 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 CDX4O14627 284 aaPredicted RBP16.41■□□□□ 0.22
CLDN4-201ENST00000340958 PROM1O43490 865 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 TBX19O60806 448 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 KRT36O76013 467 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 SCELO95171 688 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 CSF2RBP32927 897 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 CHI3L1P36222 383 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms