RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PGFP49763 221 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 FRMD7Q6ZUT3 714 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 PGBD5Q8N414 524 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 WDR60Q8WVS4 1066 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 ROPN1LQ96C74 230 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.25□□□□□ -0.45
LIN54-201ENST00000340417 hCG_2039718K7EN88 272 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 GPR39O43194 453 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 SOX30O94993 753 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 SERPINA1P01009 418 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 CYP4B1P13584 511 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 GDF1P27539 372 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 PRDX3P30048 256 aaKnown RBP12.25□□□□□ -0.45
LIN54-201ENST00000340417 DCDC1P59894 354 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 GTF2IRD2BQ6EKJ0 949 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 GTF2IRD2Q86UP8 949 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 FUBP1Q96AE4 644 aaKnown RBP12.25□□□□□ -0.45
LIN54-201ENST00000340417 FCRL4Q96PJ5 515 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 GJE1A6NN92 205 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 KLK10O43240 276 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 ZFAND5O76080 213 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 POU2F2P09086 479 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 GABREP78334 506 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 CDK6Q00534 326 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 EMX2Q04743 252 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 TRIP6Q15654 476 aaKnown RBP12.25□□□□□ -0.45
LIN54-201ENST00000340417 TECRLQ5HYJ1 363 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 LCN1P1Q5VSP4 162 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 RNF130Q86XS8 419 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 CD200R1Q8TD46 325 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 RADILQ96JH8 1075 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 DOHHQ9BU89 302 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 EHD3Q9NZN3 535 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 PTGFRNQ9P2B2 879 aa12.25□□□□□ -0.45
LIN54-201ENST00000340417 TP73O15350 636 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 SASH3O75995 380 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 GRIK2Q13002 908 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 MRPL49Q13405 166 aaKnown RBP12.24□□□□□ -0.45
LIN54-201ENST00000340417 GRHL2Q6ISB3 625 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 RTP4Q96DX8 246 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 NSUN5Q96P11 429 aaKnown RBP12.24□□□□□ -0.45
LIN54-201ENST00000340417 MUC13Q9H3R2 512 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 PLEKHM1Q9Y4G2 1056 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 DRD4P21917 467 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 PSMB5P28074 263 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 EPHA4P54764 986 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 DNAJB13P59910 316 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 OR4D1Q15615 310 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 C18orf21Q32NC0 220 aaPredicted RBP12.24□□□□□ -0.45
LIN54-201ENST00000340417 IQCKQ8N0W5 287 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 PLD6Q8N2A8 252 aaKnown RBP12.24□□□□□ -0.45
LIN54-201ENST00000340417 LNX2Q8N448 690 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 TOR1AIP2Q8NFQ8 470 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 OR2L5Q8NG80 312 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 CHRDQ9H2X0 955 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 SEMA6CQ9H3T2 930 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 C14orf105Q9NVL8 296 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.24□□□□□ -0.45
LIN54-201ENST00000340417 TRBC2A0A5B9 178 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 BHMG1C9JSJ3 638 aaPredicted RBP12.24□□□□□ -0.45
LIN54-201ENST00000340417 CTSKP43235 329 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 PTPRRQ15256 657 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 ENPP6Q6UWR7 440 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 DHRS13Q6UX07 377 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 CACTIN-AS1Q8N1I8 211 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 FRMD1Q8N878 549 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 ACVR2AP27037 513 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 CLRN1P58418 232 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 TTC23Q5W5X9 447 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 OR9A4Q8NGU2 314 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 RAB8BQ92930 207 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 MACROD1Q9BQ69 325 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 A0A1W2PRG6 482 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 VSTM2BA6NLU5 285 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 ITM2AO43736 263 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 RNF144AP50876 292 aaPredicted RBP12.24□□□□□ -0.45
LIN54-201ENST00000340417 PRSS36Q5K4E3 855 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 ZNF548Q8NEK5 533 aaPredicted RBP12.24□□□□□ -0.45
LIN54-201ENST00000340417 SNX33Q8WV41 574 aa12.24□□□□□ -0.45
LIN54-201ENST00000340417 PRR23D1E9PI22 279 aaPredicted RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 H0YGG7 62 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 PRR23D2P0DMB1 279 aaPredicted RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 MSX2P35548 267 aaPredicted RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 ARF3P61204 181 aaPredicted RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 GANABQ14697 944 aaKnown RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 TMPPEQ6ZT21 453 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 TANKQ92844 425 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 NMUR2Q9GZQ4 415 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 CKLFQ9UBR5 152 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 TMEM202A6NGA9 273 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 GFRA3O60609 400 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 BMP1P13497 986 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 MERTKQ12866 999 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 INAQ16352 499 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 NRF1Q16656 503 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 UBAP2Q5T6F2 1119 aaKnown RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 IER5LQ5T953 404 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 NDUFAF5Q5TEU4 345 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 AFMIDQ63HM1 303 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 SYVN1Q86TM6 617 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms