RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ZNF282Q9UDV7 671 aaPredicted RBP7.02□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF451Q9Y4E5 1061 aa7.02□□□□□ -1.28
SRFBP1-201ENST00000339397 ZDBF2Q9HCK1 2354 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 SPTY2D1-AS1A0A0U1RR47 76 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 TRBC2A0A5B9 178 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 FAM170BA6NMN3 283 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 H0YJX3 145 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 J3KTA2 159 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 E2F6O75461 281 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 CLEC3AO75596 197 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 SEMA3DO95025 777 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 SHMT2P34897 504 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 FEN1P39748 380 aaKnown RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 DGKEP52429 567 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 OLR1P78380 273 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 KCNJ10P78508 379 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 SRSF5Q13243 272 aaKnown RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 GPR19Q15760 415 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 DUSP7Q16829 419 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 TJAP1Q5JTD0 557 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 TOR1AIP1Q5JTV8 583 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 C10orf62Q5T681 223 aaPredicted RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 KIAA0895LQ68EN5 471 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 PTCRAQ6ISU1 281 aaPredicted RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 KRT80Q6KB66 452 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 CBLL1Q75N03 491 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 SYT13Q7L8C5 426 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 WDR53Q7Z5U6 358 aaPredicted RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 TAF8Q7Z7C8 310 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 CYP4Z1Q86W10 505 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 NUDT13Q86X67 352 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 CCDC116Q8IYX3 515 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 ZNF786Q8N393 782 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 TSTD1Q8NFU3 115 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 OR5D16Q8NGK9 328 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 TAMM41Q96BW9 452 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 CNRIP1Q96F85 164 aaPredicted RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 C7orf34Q96L11 122 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 CDX2Q99626 313 aaPredicted RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 GRIP2Q9C0E4 1043 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 TOR3AQ9H497 397 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 GLIPR2Q9H4G4 154 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 SERHL2Q9H4I8 314 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 POLMQ9NP87 494 aaPredicted RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 OR6C2Q9NZP2 312 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 CPNE7Q9UBL6 633 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 PCOLCE2Q9UKZ9 415 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 MRPS2Q9Y399 296 aaKnown RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 ASB4Q9Y574 426 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 PCDH15Q96QU1 1955 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 IGHV1OR15-9A0A0B4J2B8 117 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 PRAMEF27A3QJZ7 478 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 ZNF860A6NHJ4 632 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 PRAMEF26H0Y7S4 382 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 KIF1CO43896 1103 aaKnown RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 EIF2S1P05198 315 aaKnown RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 GLULP15104 373 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 UGT2B7P16662 529 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 HIST1H1TP22492 207 aaPredicted RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 ATP5A1P25705 553 aaKnown RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 ELK4P28324 431 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 CD6P30203 668 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 HSPA13P48723 471 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 PRIM2P49643 509 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 ALDH3A2P51648 485 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 PRKAG1P54619 331 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 BTN3A2P78410 334 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 EEF1A2Q05639 463 aaKnown RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 ILF3Q12906 894 aaKnown RBP eCLIP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 HEPACAMQ14CZ8 416 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 FCRL6Q6DN72 434 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 CEACAM20Q6UY09 585 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 OR4N5Q8IXE1 308 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 DHRSXQ8N5I4 330 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 FAM46DQ8NEK8 389 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 OR52E4Q8NGH9 312 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 OR52J3Q8NH60 311 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 ZCCHC10Q8TBK6 192 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 STARD8Q92502 1023 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 HLA-CQ95604 372 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 MAPKAP1Q9BPZ7 522 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 OSBPL10Q9BXB5 764 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 ASPSCR1Q9BZE9 553 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 EPS8L2Q9H6S3 715 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 SLC2A4RGQ9NR83 387 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 TRNAU1APQ9NX07 287 aaKnown RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 TMEFF2Q9UIK5 374 aaPredicted RBP7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 PADI4Q9UM07 663 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 HS3ST3A1Q9Y663 406 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 AP1M2Q9Y6Q5 423 aa7.02□□□□□ -1.29
SRFBP1-201ENST00000339397 A0A1W2PPC4 97 aa7.01□□□□□ -1.29
SRFBP1-201ENST00000339397 TNFRSF10CO14798 259 aa7.01□□□□□ -1.29
SRFBP1-201ENST00000339397 HS6ST1O60243 411 aa7.01□□□□□ -1.29
SRFBP1-201ENST00000339397 KCNJ13O60928 360 aa7.01□□□□□ -1.29
SRFBP1-201ENST00000339397 CLPTM1O96005 669 aa7.01□□□□□ -1.29
SRFBP1-201ENST00000339397 SEMG1P04279 462 aa7.01□□□□□ -1.29
SRFBP1-201ENST00000339397 ZNF888P0CJ79 500 aaPredicted RBP7.01□□□□□ -1.29
SRFBP1-201ENST00000339397 CYP4B1P13584 511 aa7.01□□□□□ -1.29
SRFBP1-201ENST00000339397 ETS2P15036 469 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms