RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 BOCQ9BWV1 1114 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 LHPPQ9H008 270 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 FXYD6Q9H0Q3 95 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 POLMQ9NP87 494 aaPredicted RBP13.21□□□□□ -0.3
RTN4-202ENST00000337526 PNO1Q9NRX1 252 aaKnown RBP13.21□□□□□ -0.3
RTN4-202ENST00000337526 TMEM181Q9P2C4 612 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 SPO11Q9Y5K1 396 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 CDH10Q9Y6N8 788 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 FLRT2O43155 660 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 FGF18O76093 207 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 SLC6A6P31641 620 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 C6orf120Q7Z4R8 191 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 TRAM1L1Q8N609 369 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 SLC15A4Q8N697 577 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 INO80EQ8NBZ0 244 aaPredicted RBP13.2□□□□□ -0.3
RTN4-202ENST00000337526 ABHD11Q8NFV4 315 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 HUS1BQ8NHY5 278 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 THEM6Q8WUY1 208 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 PCDHB14Q9Y5E9 798 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 NUP188Q5SRE5 1749 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 TRAV6A0A075B6T7 132 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 OR2AT4A6NND4 320 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 L7N2F9 121 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 B4GALT2O60909 372 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 GSTT2P0CG29 244 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 BPIP17213 487 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 RBM34P42696 430 aaKnown RBP13.2□□□□□ -0.3
RTN4-202ENST00000337526 PPP5CP53041 499 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 TBPL1P62380 186 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 ID2Q02363 134 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 OR52E8Q6IFG1 317 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 JAGN1Q8N5M9 183 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 SHKBP1Q8TBC3 707 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 TMEM125Q96AQ2 219 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 S100A16Q96FQ6 103 aaKnown RBP13.2□□□□□ -0.3
RTN4-202ENST00000337526 SPATA9Q9BWV2 254 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 XKR8Q9H6D3 395 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 ACSL6Q9UKU0 697 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 A0A1W2PQ45 241 aaPredicted RBP13.2□□□□□ -0.3
RTN4-202ENST00000337526 A0A1W2PQY0 241 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 NOTOA8MTQ0 251 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 ZNF670-ZNF695F2Z2N8 137 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 RLN2P04090 185 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 CDKN1CP49918 316 aaPredicted RBP13.2□□□□□ -0.3
RTN4-202ENST00000337526 CDKL1Q00532 357 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 ZNF548Q8NEK5 533 aaPredicted RBP13.2□□□□□ -0.3
RTN4-202ENST00000337526 BBS10Q8TAM1 723 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 ELOVL2Q9NXB9 296 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 RDH8Q9NYR8 311 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 ACSL5Q9ULC5 683 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 ASGR2P07307 311 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 LAMP1P11279 417 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 FSHRP23945 695 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 MAGEA2P43356 314 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 RPS26P62854 115 aaKnown RBP13.2□□□□□ -0.3
RTN4-202ENST00000337526 SCGB2B2Q4G0G5 96 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 RTP2Q5QGT7 225 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 PSD4Q8NDX1 1056 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 OR4K14Q8NGD5 310 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 LRR1Q96L50 414 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 EPYCQ99645 322 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 TRPV4Q9HBA0 871 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 ZFR2Q9UPR6 939 aaKnown RBP13.2□□□□□ -0.3
RTN4-202ENST00000337526 MYH13Q9UKX3 1938 aa13.2□□□□□ -0.3
RTN4-202ENST00000337526 SCDO00767 359 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 PRH1P02810 166 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 FCER2P06734 321 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 RPS3P23396 243 aaKnown RBP eCLIP13.19□□□□□ -0.33e-16■■□□□ 11.6
RTN4-202ENST00000337526 KLHL26Q53HC5 615 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 C22orf42Q6IC83 251 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 IL17FQ96PD4 163 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 F2RL3Q96RI0 385 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 KLHL33A6NCF5 533 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 RETP07949 1114 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 GPX3P22352 226 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 SLC9A3P48764 834 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 EIF5AP63241 154 aaKnown RBP13.19□□□□□ -0.3
RTN4-202ENST00000337526 ODF4Q2M2E3 257 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 AMZ1Q400G9 498 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 ZNF776Q68DI1 518 aaPredicted RBP13.19□□□□□ -0.3
RTN4-202ENST00000337526 KDELC1Q6UW63 502 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 LARP4Q71RC2 724 aaKnown RBP eCLIP13.19□□□□□ -0.3
RTN4-202ENST00000337526 PRSS48Q7RTY5 328 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 SCD5Q86SK9 330 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 ANKRD13BQ86YJ7 626 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 ADGRG5Q8IZF4 528 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 OR2T33Q8NG76 320 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 OR13J1Q8NGT2 312 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 NETO1Q8TDF5 533 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 HMGB4Q8WW32 186 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 TFAP2CQ92754 450 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 LRIG1Q96JA1 1093 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 ZNF597Q96LX8 424 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 TTTY10Q9BZA0 68 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 SMURF1Q9HCE7 757 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 GPR83Q9NYM4 423 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 KANTRA0A1W2PQU2 76 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 H3BSH0 61 aa13.19□□□□□ -0.3
RTN4-202ENST00000337526 RTCAO00442 366 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms