RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SYNPOQ8N3V7 929 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ZBTB44Q8NCP5 570 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 DENND6BQ8NEG7 585 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 OR6F1Q8NGZ6 308 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 IMP4Q96G21 291 aaKnown RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SLC25A13Q9UJS0 675 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 CIB4A0PJX0 185 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 J3QLW9 94 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 NCR1O76036 304 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 CD3GP09693 182 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ACPPP15309 386 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 FOSL2P15408 326 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF19P17023 458 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 RPS19P39019 145 aaKnown RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 RPS26P62854 115 aaKnown RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 PTGES3Q15185 160 aaKnown RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 CLVS2Q5SYC1 327 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 IL20RBQ6UXL0 311 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 TMEM179BQ7Z7N9 219 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 PTRH1Q86Y79 214 aaKnown RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 KLBQ86Z14 1044 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ENTHD1Q8IYW4 607 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 CELF5Q8N6W0 485 aaKnown RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SNX33Q8WV41 574 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 HMGB4Q8WW32 186 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 USP7Q93009 1102 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SLC39A13Q96H72 371 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF300Q96RE9 604 aaPredicted RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SPATA5L1Q9BVQ7 753 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 PADI3Q9ULW8 664 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ENTPD4Q9Y227 616 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 PIP5K1CO60331 668 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 SLC22A5O76082 557 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 ARCN1P48444 511 aaKnown RBP12.72□□□□□ -0.37
COL2A1-201ENST00000337299 AP3S2P59780 193 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 DSTNP60981 165 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 RRAS2P62070 204 aaPredicted RBP12.72□□□□□ -0.37
COL2A1-201ENST00000337299 ARHGAP1Q07960 439 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 LARS2Q15031 903 aaKnown RBP12.72□□□□□ -0.37
COL2A1-201ENST00000337299 USF2Q15853 346 aaPredicted RBP12.72□□□□□ -0.37
COL2A1-201ENST00000337299 LEXMQ3ZCV2 418 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 PTPN18Q99952 460 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 CD244Q9BZW8 370 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 OR51J1Q9H342 316 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 ZFP37Q9Y6Q3 630 aaPredicted RBP12.72□□□□□ -0.37
COL2A1-201ENST00000337299 TEX51A0A1B0GUA7 166 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 PTPN6P29350 595 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 NTSP30990 170 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 CDH4P55283 916 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 TIGD5Q53EQ6 642 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 GPR149Q86SP6 731 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 PDZD3Q86UT5 571 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 FAM98AQ8NCA5 519 aaKnown RBP12.72□□□□□ -0.37
COL2A1-201ENST00000337299 IL17RDQ8NFM7 739 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 SLC29A3Q9BZD2 475 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 SAP130Q9H0E3 1048 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 FANCFQ9NPI8 374 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 MARK1Q9P0L2 795 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 MUTYHQ9UIF7 546 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 FBXL3Q9UKT7 428 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 SARDHQ9UL12 918 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 METTL21EPA6NDL7 271 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 EBLN1P0CF75 366 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 RPL3P39023 403 aaKnown RBP12.72□□□□□ -0.37
COL2A1-201ENST00000337299 MAGEA12P43365 314 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 COL9A2Q14055 689 aaPredicted RBP12.72□□□□□ -0.37
COL2A1-201ENST00000337299 PDZD9Q8IXQ8 264 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 TSGA13Q96PP4 275 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 OR4K3Q96R72 315 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 ATOH8Q96SQ7 321 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 POT1Q9NUX5 634 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 IL20RAQ9UHF4 553 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 CEP290O15078 2479 aa12.72□□□□□ -0.37
COL2A1-201ENST00000337299 C1QAP02745 245 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 C9orf64Q5T6V5 341 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.71□□□□□ -0.37
COL2A1-201ENST00000337299 SECISBP2Q96T21 854 aaKnown RBP12.71□□□□□ -0.37
COL2A1-201ENST00000337299 NPAP1Q9NZP6 1156 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 AHDC1Q5TGY3 1603 aaPredicted RBP12.71□□□□□ -0.37
COL2A1-201ENST00000337299 KANTRA0A1W2PQU2 76 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 FAM86C2PA6NEL3 165 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 SLC16A6O15403 523 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 CAPN5O15484 640 aaPredicted RBP12.71□□□□□ -0.37
COL2A1-201ENST00000337299 NUDT7P0C024 238 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 LAMP1P11279 417 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 FKBP1BP68106 108 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 GALK2Q01415 458 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 BAK1Q16611 211 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 OR2G6Q5TZ20 316 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 SLX4IPQ5VYV7 408 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 HSDL2Q6YN16 418 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 Q6ZSR9 355 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 CREB3L2Q70SY1 520 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 OR8J1Q8NGP2 316 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 NPLOC4Q8TAT6 608 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 KCTD13Q8WZ19 329 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 MRPL48Q96GC5 212 aaKnown RBP12.71□□□□□ -0.37
COL2A1-201ENST00000337299 UQCC2Q9BRT2 126 aa12.71□□□□□ -0.37
COL2A1-201ENST00000337299 RHBGQ9H310 441 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms