RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SLC23A1Q9UHI7 598 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 VCANP13611 3396 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 PRPS2P11908 318 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 PTPN5P54829 565 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 WNT3P56703 355 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 DBPQ10586 325 aaPredicted RBP13.28□□□□□ -0.28
SF1-202ENST00000334944 FAPQ12884 760 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 ATG9BQ674R7 924 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 PDE12Q6L8Q7 609 aaKnown RBP13.28□□□□□ -0.28
SF1-202ENST00000334944 VN1R5Q7Z5H4 357 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 KCTD20Q7Z5Y7 419 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 OR8H1Q8NGG4 311 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 HUS1BQ8NHY5 278 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 RSPRY1Q96DX4 576 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 PYURFQ96I23 114 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 RIPOR3Q96MK2 946 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 IL17FQ96PD4 163 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 TMEM45AQ9NWC5 275 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 ZNF451Q9Y4E5 1061 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 PCDHGB1Q9Y5G3 927 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 SPTBN5Q9NRC6 3674 aaKnown RBP13.28□□□□□ -0.28
SF1-202ENST00000334944 KIAA1671Q9BY89 1806 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 SLCO2B1O94956 709 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 OPN1SWP03999 348 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 TNFSF8P32971 234 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 RPS13P62277 151 aaKnown RBP13.28□□□□□ -0.28
SF1-202ENST00000334944 VLDLRP98155 873 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 MC1RQ01726 317 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 TAGLNQ01995 201 aaKnown RBP13.28□□□□□ -0.28
SF1-202ENST00000334944 PRKCDQ05655 676 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 TARDBPQ13148 414 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■□□□ 12.3
SF1-202ENST00000334944 ZNF77Q15935 545 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 ARHGAP15Q53QZ3 475 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 LRIF1Q5T3J3 769 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 CALHM3Q86XJ0 350 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 ZNF740Q8NDX6 193 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 COQ8BQ96D53 544 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 RAPGEFL1Q9UHV5 662 aa13.28□□□□□ -0.28
SF1-202ENST00000334944 CFAP20Q9Y6A4 193 aaKnown RBP13.28□□□□□ -0.28
SF1-202ENST00000334944 TRANK1O15050 2925 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 A0A1W2PQ09 198 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 GABRR3A8MPY1 467 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 PRRT4C9JH25 899 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 OR2B3O76000 313 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 TGFB1P01137 390 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 VIPP01282 170 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 ANXA4P09525 319 aaPredicted RBP13.27□□□□□ -0.28
SF1-202ENST00000334944 CLEC2LP0C7M8 214 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 ACPPP15309 386 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 DDCP20711 480 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 NRIP1P48552 1158 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 DGKGP49619 791 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 CREMQ03060 361 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 DHCR24Q15392 516 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 ZNF805Q5CZA5 627 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 CDH24Q86UP0 819 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 NELL1Q92832 810 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 DNASE1L2Q92874 299 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 AIFM2Q9BRQ8 373 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 ASIC5Q9NY37 505 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 GLTPQ9NZD2 209 aa13.27□□□□□ -0.28
SF1-202ENST00000334944 PCYT1BQ9Y5K3 369 aaPredicted RBP13.27□□□□□ -0.28
SF1-202ENST00000334944 FAM220BPB1ANY3 271 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 M0R129 80 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 ARHGEF9O43307 516 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 MMP20O60882 483 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 ATG13O75143 517 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 KCNK5O95279 499 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 HPRP00739 348 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 MPC1LP0DKB6 136 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 SSTR4P31391 388 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 AP1S2P56377 157 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 KRR1Q13601 381 aaKnown RBP13.27□□□□□ -0.29
SF1-202ENST00000334944 DUOXA1Q1HG43 343 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 ZNF852Q6ZMS4 543 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 PLEKHM3Q6ZWE6 761 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 TRMT11Q7Z4G4 463 aaKnown RBP13.27□□□□□ -0.29
SF1-202ENST00000334944 ADHFE1Q8IWW8 467 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 OR7G3Q8NG95 312 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 WDR20Q8TBZ3 569 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 BCL7BQ9BQE9 202 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 OR51B5Q9H339 312 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 ACSL6Q9UKU0 697 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 LYVE1Q9Y5Y7 322 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 NUMA1Q14980 2115 aa13.27□□□□□ -0.29
SF1-202ENST00000334944 SMIM30A4D0T7 59 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 H3BM21 787 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 PDGFAP04085 211 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 ZNF30P17039 623 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 HNF4AP41235 474 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 GAB1Q13480 694 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 GGTA1PQ4G0N0 100 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 ABI3BPQ7Z7G0 1075 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 CCDC71Q8IV32 467 aaPredicted RBP13.26□□□□□ -0.29
SF1-202ENST00000334944 PLPP6Q8IY26 295 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 CHPFQ8IZ52 775 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 MMP21Q8N119 569 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 AADATQ8N5Z0 425 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 TRAM1L1Q8N609 369 aa13.26□□□□□ -0.29
SF1-202ENST00000334944 GPR151Q8TDV0 419 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms