RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 BCDIN3DQ7Z5W3 292 aaKnown RBP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 GDPD1Q8N9F7 314 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 OR8J2Q8NGG1 315 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 OR8H1Q8NGG4 311 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 PKP4Q99569 1192 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 GDF15Q99988 308 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 TAPBPLQ9BX59 468 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 NARFLQ9H6Q4 476 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 C12orf10Q9HB07 376 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 GKN1Q9NS71 199 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 ENOPH1Q9UHY7 261 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 ATPIF1Q9UII2 106 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 MYO15AQ9UKN7 3530 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 B8ZZF3 427 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 E9PQ18 207 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 TLR4O00206 839 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 SLC2A2P11168 524 aaPredicted RBP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 IL32P24001 234 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 CRYBB2P43320 205 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 MAN2A2P49641 1150 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 ARF5P84085 180 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 PAQR6Q6TCH4 344 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 CASP12Q6UXS9 341 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 C1orf52Q8N6N3 182 aaKnown RBP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 HJURPQ8NCD3 748 aaPredicted RBP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 TMEM80Q96HE8 168 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 RUVBL1Q9Y265 456 aaKnown RBP13.14□□□□□ -0.31
SYNE3-201ENST00000334258 ALG5Q9Y673 324 aa13.14□□□□□ -0.31
SYNE3-201ENST00000334258 GCM2O75603 506 aaPredicted RBP13.13□□□□□ -0.31
SYNE3-201ENST00000334258 ALPPP05187 535 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 SRCP12931 536 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 APEX1P27695 318 aaKnown RBP13.13□□□□□ -0.31
SYNE3-201ENST00000334258 MAP2K3P46734 347 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 ALDH9A1P49189 494 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 RHAGQ02094 409 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 DUSP4Q13115 394 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 WSCD2Q2TBF2 565 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 GCNT6Q5T4J0 391 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 METTL2BQ6P1Q9 378 aaKnown RBP13.13□□□□□ -0.31
SYNE3-201ENST00000334258 ZNF852Q6ZMS4 543 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 GDPGP1Q6ZNW5 385 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 SLC24A5Q71RS6 500 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 PLCZ1Q86YW0 608 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 OR4C15Q8NGM1 316 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 OR5AK3PQ8NH89 298 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 PIP5K1AQ99755 562 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 HDHD5Q9BXW7 423 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 ACSL6Q9UKU0 697 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 TMCC3Q9ULS5 477 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 PRMT3O60678 531 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 ZNF623O75123 536 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 AOAHP28039 575 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 SDC2P34741 201 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 PXNP49023 591 aaPredicted RBP13.13□□□□□ -0.31
SYNE3-201ENST00000334258 MZT2BQ6NZ67 158 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 NLGN4YQ8NFZ3 816 aaPredicted RBP13.13□□□□□ -0.31
SYNE3-201ENST00000334258 ASIC4Q96FT7 647 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 HTATIP2Q9BUP3 242 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 MND1Q9BWT6 205 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.13□□□□□ -0.31
SYNE3-201ENST00000334258 ANKRA2Q9H9E1 313 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 NMNAT1Q9HAN9 279 aaPredicted RBP13.13□□□□□ -0.31
SYNE3-201ENST00000334258 ACER3Q9NUN7 267 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 MCUBQ9NWR8 336 aa13.13□□□□□ -0.31
SYNE3-201ENST00000334258 ATP6V1G2-DDX39BF2Z307 99 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 K7ERQ8 282 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 PLA2G10O15496 165 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 PRAMEF4O60810 478 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 OAZ2O95190 189 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 IGFBP1P08833 259 aaPredicted RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 CYP2A6P11509 494 aaPredicted RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 BPIP17213 487 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 SOAT1P35610 550 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 CHI3L1P36222 383 aaPredicted RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 CAV3P56539 151 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 TEKQ02763 1124 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 TSTA3Q13630 321 aaPredicted RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 GPNMBQ14956 572 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 ZXDCQ2QGD7 858 aaPredicted RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 PRAMEF9Q5VWM5 478 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 RSPO2Q6UXX9 243 aaPredicted RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 ZNF784Q8NCA9 323 aaPredicted RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 PHF21AQ96BD5 680 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 CCDC120Q96HB5 630 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 SNX11Q9Y5W9 270 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 SPIN1Q9Y657 262 aaPredicted RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 CHD9Q3L8U1 2897 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 TRIOO75962 3097 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 KCNE1BA0A087WTH5 132 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 ARPC4-TTLL3A0A0A6YYG9 625 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 IQCMA0A1B0GVH7 501 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 TMEM229AB2RXF0 380 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 PEX14O75381 377 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 GBAP04062 536 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 CPN2P22792 545 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 PKLRP30613 574 aa13.12□□□□□ -0.31
SYNE3-201ENST00000334258 CORO1AP31146 461 aaKnown RBP13.12□□□□□ -0.31
SYNE3-201ENST00000334258 CCR7P32248 378 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms