RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CUL3Q13618 768 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 ELOAQ14241 798 aaKnown RBP25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 C10orf62Q5T681 223 aaPredicted RBP25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 BCORP1Q8N888 145 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 C7orf57Q8NEG2 295 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 ZBTB26Q9HCK0 441 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 SEMA4BQ9NPR2 832 aaPredicted RBP25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 MS4A12Q9NXJ0 267 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 TMEM216Q9P0N5 145 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 TBK1Q9UHD2 729 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 FBXW2Q9UKT8 454 aa25.82■■□□□ 1.72
ATPAF1-201ENST00000329231 ANKUB1A6NFN9 424 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 GABRR3A8MPY1 467 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 IFNA16P05015 189 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 CLCN2P51788 898 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 NEK2P51955 445 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 SRSF1Q07955 248 aaKnown RBP eCLIP25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 TRAF3Q13114 568 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 TUBA3CQ13748 450 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 TTC19Q6DKK2 380 aaPredicted RBP25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 TUBA3EQ6PEY2 450 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 MILR1Q7Z6M3 343 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 ZCCHC7Q8N3Z6 543 aaKnown RBP25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 SORBS1Q9BX66 1292 aaKnown RBP25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 C1QTNF3Q9BXJ4 246 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 ALOXE3Q9BYJ1 711 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 DEFB126Q9BYW3 111 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 PPT2Q9UMR5 302 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 PPIEQ9UNP9 301 aaKnown RBP25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 ESPL1Q14674 2120 aa25.81■■□□□ 1.72
ATPAF1-201ENST00000329231 MAN1A2O60476 641 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 OTCP00480 354 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 GSTA1P08263 222 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 PPP2R1BP30154 601 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 CD96P40200 585 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 SERTAD2Q14140 314 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 ELAVL1Q15717 326 aaKnown RBP25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 ERCC6LQ2NKX8 1250 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 EIF2S3LQ2VIR3 472 aaKnown RBP25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 GGTA1PQ4G0N0 100 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 FRG2Q64ET8 278 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 TMEM132CQ8N3T6 1108 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 HORMAD2Q8N7B1 307 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 APCDD1LQ8NCL9 501 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 ST6GALNAC3Q8NDV1 305 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 ZNF483Q8TF39 744 aaPredicted RBP25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 VMP1Q96GC9 406 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 FRG2BQ96QU4 278 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 SERPINI1Q99574 410 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 PPCSQ9HAB8 311 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 PHF11Q9UIL8 331 aa25.8■■□□□ 1.72
ATPAF1-201ENST00000329231 PRRC2CQ9Y520 2896 aaKnown RBP25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 GOLGA8RI6L899 631 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 PYGBP11216 843 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 TLX1P31314 330 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 HERVK_113P63132 956 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 IFT88Q13099 833 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 ZNF766Q5HY98 468 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 GPR180Q86V85 440 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 PRR7Q8TB68 274 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 AENQ8WTP8 325 aaKnown RBP25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 MZB1Q8WU39 189 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 DAZLQ92904 295 aaKnown RBP25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 MTFMTQ96DP5 389 aaKnown RBP25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 ERVK-6Q9BXR3 956 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 OLAHQ9NV23 265 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 VTI1BQ9UEU0 232 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 PCDHGB6Q9Y5F9 930 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 CLCA3PQ9Y6N3 262 aa25.79■■□□□ 1.72
ATPAF1-201ENST00000329231 TRBV11-1A0A0K0K1C0 115 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 LDB3O75112 727 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 AGFG2O95081 481 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 RASAL1O95294 804 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 SHBGP04278 402 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 EDN3P14138 238 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 HSD17B3P37058 310 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 MLF1P58340 268 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 OC90Q02509 493 aaPredicted RBP25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 OR1C1Q15619 314 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 EMBQ6PCB8 327 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 OR4F6Q8NGB9 312 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 NCLNQ969V3 563 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 TAAR6Q96RI8 345 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 DDX31Q9H8H2 851 aaKnown RBP25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 LYARQ9NX58 379 aaKnown RBP25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 ANKRD10Q9NXR5 420 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 DCDC2Q9UHG0 476 aa25.78■■□□□ 1.72
ATPAF1-201ENST00000329231 FCHO1O14526 889 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 SEMA3DO95025 777 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 ETHE1O95571 254 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 CD46P15529 392 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 ATP5F1P24539 256 aaPredicted RBP25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 TPP2P29144 1249 aaPredicted RBP25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 BSGP35613 385 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 GPR143P51810 404 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 CDH13P55290 713 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 CYP20A1Q6UW02 462 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 RPS27LQ71UM5 84 aaKnown RBP25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 ARMC10Q8N2F6 343 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 MDS2Q8NDY4 140 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms