RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 GPR89BP0CG08 455 aa21.29■■□□□ 1
PNKP-201ENST00000322344 MANFP55145 182 aaKnown RBP21.29■■□□□ 1
PNKP-201ENST00000322344 SPRED2Q7Z698 418 aa21.29■■□□□ 1
PNKP-201ENST00000322344 SFTPA1Q8IWL2 248 aa21.29■■□□□ 1
PNKP-201ENST00000322344 RAB42Q8N4Z0 105 aa21.29■■□□□ 1
PNKP-201ENST00000322344 ANKRD53Q8N9V6 530 aa21.29■■□□□ 1
PNKP-201ENST00000322344 LGALS12Q96DT0 336 aa21.29■■□□□ 1
PNKP-201ENST00000322344 F2RL3Q96RI0 385 aa21.29■■□□□ 1
PNKP-201ENST00000322344 J3KTA2 159 aa21.29■■□□□ 1
PNKP-201ENST00000322344 PDE9AO76083 593 aa21.29■■□□□ 1
PNKP-201ENST00000322344 SLC35G4P0C7Q5 338 aa21.29■■□□□ 1
PNKP-201ENST00000322344 GABRB1P18505 474 aa21.29■■□□□ 1
PNKP-201ENST00000322344 CBLP22681 906 aa21.29■■□□□ 1
PNKP-201ENST00000322344 IDUAP35475 653 aa21.29■■□□□ 1
PNKP-201ENST00000322344 IDH2P48735 452 aaKnown RBP21.29■■□□□ 1
PNKP-201ENST00000322344 LSM3P62310 102 aaKnown RBP21.29■■□□□ 1
PNKP-201ENST00000322344 ITGADQ13349 1161 aa21.29■■□□□ 1
PNKP-201ENST00000322344 TMC5Q6UXY8 1006 aa21.29■■□□□ 1
PNKP-201ENST00000322344 NUDT13Q86X67 352 aa21.29■■□□□ 1
PNKP-201ENST00000322344 GGHQ92820 318 aa21.29■■□□□ 1
PNKP-201ENST00000322344 CUEDC1Q9NWM3 386 aaPredicted RBP21.29■■□□□ 1
PNKP-201ENST00000322344 IMPAD1Q9NX62 359 aa21.29■■□□□ 1
PNKP-201ENST00000322344 ZNF226Q9NYT6 803 aa21.29■■□□□ 1
PNKP-201ENST00000322344 KCND3Q9UK17 655 aa21.29■■□□□ 1
PNKP-201ENST00000322344 FRKP42685 505 aaPredicted RBP21.28■■□□□ 1
PNKP-201ENST00000322344 GSSP48637 474 aa21.28■■□□□ 1
PNKP-201ENST00000322344 CYP4F2P78329 520 aa21.28■■□□□ 1
PNKP-201ENST00000322344 CCDC103Q8IW40 242 aa21.28■■□□□ 1
PNKP-201ENST00000322344 OR9Q2Q8NGE9 314 aa21.28■■□□□ 1
PNKP-201ENST00000322344 RGMAQ96B86 450 aa21.28■■□□□ 1
PNKP-201ENST00000322344 MENTQ9BUN1 341 aa21.28■■□□□ 1
PNKP-201ENST00000322344 ACSL5Q9ULC5 683 aa21.28■■□□□ 1
PNKP-201ENST00000322344 IGLON5A6NGN9 336 aa21.28■■□□□ 1
PNKP-201ENST00000322344 PCDH17O14917 1159 aa21.28■■□□□ 1
PNKP-201ENST00000322344 MPZL2O60487 215 aa21.28■■□□□ 1
PNKP-201ENST00000322344 HNRNPCP07910 306 aaKnown RBP eCLIP21.28■■□□□ 1
PNKP-201ENST00000322344 CDC42P60953 191 aa21.28■■□□□ 1
PNKP-201ENST00000322344 NCS1P62166 190 aa21.28■■□□□ 1
PNKP-201ENST00000322344 WSCD2Q2TBF2 565 aa21.28■■□□□ 1
PNKP-201ENST00000322344 FBXO43Q4G163 708 aa21.28■■□□□ 1
PNKP-201ENST00000322344 FAM92BQ6ZTR7 304 aa21.28■■□□□ 1
PNKP-201ENST00000322344 PLD3Q8IV08 490 aa21.28■■□□□ 1
PNKP-201ENST00000322344 HORMAD2Q8N7B1 307 aa21.28■■□□□ 1
PNKP-201ENST00000322344 OR6Q1Q8NGQ2 317 aa21.28■■□□□ 1
PNKP-201ENST00000322344 UTP15Q8TED0 518 aaKnown RBP21.28■■□□□ 1
PNKP-201ENST00000322344 SLAMF7Q9NQ25 335 aa21.28■■□□□ 1
PNKP-201ENST00000322344 DUSP12Q9UNI6 340 aa21.28■■□□□ 1
PNKP-201ENST00000322344 EFCAB9A8MZ26 197 aa21.27■■□□□ 1
PNKP-201ENST00000322344 CACNB4O00305 520 aaPredicted RBP21.27■■□□□ 1
PNKP-201ENST00000322344 RTCAO00442 366 aaKnown RBP21.27■■□□□ 1
PNKP-201ENST00000322344 KPNA4O00629 521 aaPredicted RBP21.27■■□□□ 1
PNKP-201ENST00000322344 TEAD1P28347 426 aa21.27■■□□□ 1
PNKP-201ENST00000322344 ALDH4A1P30038 563 aa21.27■■□□□ 1
PNKP-201ENST00000322344 UGT2B10P36537 528 aa21.27■■□□□ 1
PNKP-201ENST00000322344 ALDH9A1P49189 494 aa21.27■■□□□ 1
PNKP-201ENST00000322344 PCBP4P57723 403 aaKnown RBP21.27■■□□□ 1
PNKP-201ENST00000322344 TRA2BP62995 288 aaKnown RBP21.27■■□□□ 1
PNKP-201ENST00000322344 TUBA1BP68363 451 aa21.27■■□□□ 1
PNKP-201ENST00000322344 TBC1D25Q3MII6 688 aa21.27■■□□□ 1
PNKP-201ENST00000322344 CYP27C1Q4G0S4 372 aa21.27■■□□□ 1
PNKP-201ENST00000322344 TUBA1AQ71U36 451 aa21.27■■□□□ 1
PNKP-201ENST00000322344 TAGAPQ8N103 731 aa21.27■■□□□ 1
PNKP-201ENST00000322344 ZBED6CLQ96FA7 236 aaPredicted RBP21.27■■□□□ 1
PNKP-201ENST00000322344 COL21A1Q96P44 957 aa21.27■■□□□ 1
PNKP-201ENST00000322344 ALPK1Q96QP1 1244 aa21.27■■□□□ 1
PNKP-201ENST00000322344 NDUFS4O43181 175 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 OPRD1P41143 372 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 SLC19A1P41440 591 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 AGERQ15109 404 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 COLEC12Q5KU26 742 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 SLC38A5Q8WUX1 472 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 SNRNP27Q8WVK2 155 aaKnown RBP21.26■□□□□ 0.99
PNKP-201ENST00000322344 PROX1Q92786 737 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 FGF13Q92913 245 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 ZHX1-C8orf76Q96EF9 292 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 LGR4Q9BXB1 951 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 TEX101Q9BY14 249 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 TRPV4Q9HBA0 871 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 ACSS1Q9NUB1 689 aaPredicted RBP21.26■□□□□ 0.99
PNKP-201ENST00000322344 DNAAF2Q9NVR5 837 aaKnown RBP21.26■□□□□ 0.99
PNKP-201ENST00000322344 CFAP20Q9Y6A4 193 aaKnown RBP21.26■□□□□ 0.99
PNKP-201ENST00000322344 KIF26AQ9ULI4 1882 aaPredicted RBP21.26■□□□□ 0.99
PNKP-201ENST00000322344 A0A1W2PPV9 198 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 SH3D21A4FU49 640 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 H7BY64 318 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 TOR1BO14657 336 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 RECKO95980 971 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 BCHEP06276 602 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 ATP1A4Q13733 1029 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 MLC1Q15049 377 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 DUSP7Q16829 419 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 TIGD6Q17RP2 521 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 SPDYE7PQ495Y7 208 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 C6orf120Q7Z4R8 191 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 STX19Q8N4C7 294 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 AQP11Q8NBQ7 271 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 APOBEC4Q8WW27 367 aaKnown RBP21.26■□□□□ 0.99
PNKP-201ENST00000322344 RASSF5Q8WWW0 418 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 CRELD1Q96HD1 420 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 PRAP1Q96NZ9 151 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms