RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 KIF17Q9P2E2 1029 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 RAB23Q9ULC3 237 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 SCML1Q9UN30 329 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 PADI2Q9Y2J8 665 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 TESMINQ9Y4I5 508 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 SNX11Q9Y5W9 270 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 DENND4AQ7Z401 1863 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 ISM1B1AKI9 464 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 PTGES3LE9PB15 166 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 H3BQ06 376 aaPredicted RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 BCKDKO14874 412 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 SLC16A6O15403 523 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 ERI3O43414 337 aaKnown RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 CLEC3AO75596 197 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 NDUFV2P19404 249 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 DRD1P21728 446 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 EPHA2P29317 976 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CDK9P50750 372 aaKnown RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 TPMTP51580 245 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 IL5RAQ01344 420 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 SPDYE7PQ495Y7 208 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 ZBED5Q49AG3 693 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 NDUFAF5Q5TEU4 345 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 TSEN54Q7Z6J9 526 aaKnown RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 SMRP1Q8NCR6 262 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CHDHQ8NE62 594 aaPredicted RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 BPIFB6Q8NFQ5 453 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 OR52J3Q8NH60 311 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 ZFAND2BQ8WV99 257 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 LCN9Q8WX39 176 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 OR5P2Q8WZ92 322 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 MSLNLQ96KJ4 702 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 DDX31Q9H8H2 851 aaKnown RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 SLC6A20Q9NP91 592 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 AASSQ9UDR5 926 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CDC14AQ9UNH5 594 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 WBP11Q9Y2W2 641 aaKnown RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.2□□□□□ -1.26
IFT88-201ENST00000319980 COLEC10Q9Y6Z7 277 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 CKAP5Q14008 2032 aa7.2□□□□□ -1.26
IFT88-201ENST00000319980 TRBC2A0A5B9 178 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 HAT1O14929 419 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 PRKRAO75569 313 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 TRMUO75648 421 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 HTR1BP28222 390 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ACTR1BP42025 376 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 DSTNP60981 165 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ACTR1AP61163 376 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 EEF1A2Q05639 463 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 PIGFQ07326 219 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 RAB39AQ14964 217 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ZNF630Q2M218 657 aaPredicted RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 ZC3H12BQ5HYM0 836 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 ZNF691Q5VV52 312 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ZNF793Q6ZN11 406 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 USP30Q70CQ3 517 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 AMIGO1Q86WK6 493 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 FLCNQ8NFG4 579 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 TTLQ8NG68 377 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 OR8K5Q8NH50 307 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 CNIH3Q8TBE1 160 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 HDAC2Q92769 488 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 RAB8BQ92930 207 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ZBED6CLQ96FA7 236 aaPredicted RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 SCARF2Q96GP6 870 aaPredicted RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 BMFQ96LC9 184 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 AICDAQ9GZX7 198 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 TMEM168Q9H0V1 697 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ZNF576Q9H609 170 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 NEUROD4Q9HD90 331 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 KRT84Q9NSB2 600 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 TMEM184CQ9NVA4 438 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ZNF451Q9Y4E5 1061 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 PCDHGB3Q9Y5G1 929 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 PRICKLE3O43900 615 aaPredicted RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 RASGRP1O95267 797 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 C9P02748 559 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 PEBP1P30086 187 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 PCBP4P57723 403 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 TP53BP2Q13625 1128 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 SLC9A5Q14940 896 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 IFI44LQ53G44 452 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 RBM48Q5RL73 367 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 BROXQ5VW32 411 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 GPR107Q5VW38 600 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 KIAA1614Q5VZ46 1190 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 CWF19L1Q69YN2 538 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 LAIR2Q6ISS4 152 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ZNF773Q6PK81 442 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 C6orf120Q7Z4R8 191 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 JAZF1Q86VZ6 243 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 HORMAD2Q8N7B1 307 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 TTC29Q8NA56 475 aaPredicted RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 NRBF2Q96F24 287 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 FCRL4Q96PJ5 515 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 GABARAPL1Q9H0R8 117 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 RAD21L1Q9H4I0 556 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 EPS8L2Q9H6S3 715 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 KCNK12Q9HB15 430 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 EBF1Q9UH73 591 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms