RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SIPA1Q96FS4 1042 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 NODALQ96S42 347 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 MTERF1Q99551 399 aaKnown RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 BDH2Q9BUT1 245 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 GPRC5BQ9NZH0 403 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 DNMT3AQ9Y6K1 912 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D3DA0A087WVF3 549 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D3IA0A087WXS9 549 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D3EA0A087X179 549 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D3KA0A087X1G2 549 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D3FA6NER0 549 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D3LB9A6J9 549 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 SLC31A1O15431 190 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 PDPK1O15530 556 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 INMTO95050 263 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D3HP0C7X1 549 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 ERGP11308 486 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 PCNAP12004 261 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 ACP5P13686 325 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 UGT2B10P36537 528 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 HNF4AP41235 474 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 PLIN5Q00G26 463 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 SGCGQ13326 291 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 DDX39BQ13838 428 aaKnown RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 FAM174BQ3ZCQ3 159 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TPRG1LQ5T0D9 272 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 FAM205BPQ63HN1 556 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D3GQ6DHY5 549 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D3CQ6IPX1 549 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 CAPN13Q6MZZ7 669 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 MSRB3Q8IXL7 192 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TBC1D3Q8IZP1 549 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 CADM2Q8N3J6 435 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 C2orf73Q8N5S3 287 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 OR7G3Q8NG95 312 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 FAR1Q8WVX9 515 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 PIK3R3Q92569 461 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 APOLD1Q96LR9 279 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 HHIPQ96QV1 700 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 APOOQ9BUR5 198 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 DPY30Q9C005 99 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 ADNPQ9H2P0 1102 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 SGK2Q9HBY8 427 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 PHPT1Q9NRX4 125 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TNFRSF10DQ9UBN6 386 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 FZD4Q9ULV1 537 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 SLC17A4Q9Y2C5 497 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 CA5BQ9Y2D0 317 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 PLXND1Q9Y4D7 1925 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 A0A0G2JMP0 313 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 POM121BA6NF01 834 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 HMX3A6NHT5 357 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 MAGEB17A8MXT2 336 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 SCAMP1O15126 338 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 PRSS23O95084 383 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 ACSL1P33121 698 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 GSK3BP49841 420 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 CLDN8P56748 225 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 RAE1P78406 368 aaKnown RBP12.46□□□□□ -0.41
CPNE1-201ENST00000317677 CSTF3Q12996 717 aaKnown RBP12.46□□□□□ -0.41
CPNE1-201ENST00000317677 MLF2Q15773 248 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-201ENST00000317677 SYT6Q5T7P8 510 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-201ENST00000317677 CACHD1Q5VU97 1274 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 LYPD8Q6UX82 237 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 BMP8AQ7Z5Y6 402 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 LURAP1LQ8IV03 231 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 RIMKLAQ8IXN7 391 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 MCFD2Q8NI22 146 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 GTF2H4Q92759 462 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 ZNF566Q969W8 418 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 MAGEB10Q96LZ2 347 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-201ENST00000317677 TSSK3Q96PN8 268 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 EBPLQ9BY08 206 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 DGCR6LQ9BY27 220 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 ALOXE3Q9BYJ1 711 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 KCNN2Q9H2S1 579 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 SOX17Q9H6I2 414 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-201ENST00000317677 ITM2CQ9NQX7 267 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 SLC6A13Q9NSD5 602 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 KCNK6Q9Y257 313 aa12.46□□□□□ -0.41
CPNE1-201ENST00000317677 ZDBF2Q9HCK1 2354 aa12.46□□□□□ -0.42
CPNE1-201ENST00000317677 A0A1W2PQ72 361 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 TCRBV5S2A0A599 114 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 TBX1O43435 398 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 DFNA5O60443 496 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 SH3BGRLO75368 114 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 THRBP10828 461 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 GLULP15104 373 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 CLCNKAP51800 687 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 ARSFP54793 590 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 CLDN2P57739 230 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 MEF2AQ02078 507 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 TSTA3Q13630 321 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 DAG1Q14118 895 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 PYCR3Q53H96 274 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 NOXRED1Q6NXP6 359 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 USP30Q70CQ3 517 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 P2RY8Q86VZ1 359 aa12.45□□□□□ -0.42
CPNE1-201ENST00000317677 PTRH1Q86Y79 214 aaKnown RBP12.45□□□□□ -0.42
CPNE1-201ENST00000317677 DCUN1D3Q8IWE4 304 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms