RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 FRKP42685 505 aaPredicted RBP3.71□□□□□ -1.82
SMCO3-201ENST00000316048 FMO5P49326 533 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 MLLT10P55197 1068 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 CDH11P55287 796 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 RPS18P62269 152 aaKnown RBP3.71□□□□□ -1.82
SMCO3-201ENST00000316048 CCNA1P78396 465 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 CNTN2Q02246 1040 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 TAF10Q12962 218 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 CBX3Q13185 183 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 IRAK1BP1Q5VVH5 260 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 FAM46CQ5VWP2 391 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 CDK20Q8IZL9 346 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 DAW1Q8N136 415 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF619Q8N2I2 560 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 TRIM58Q8NG06 486 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 ELP5Q8TE02 316 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 CCDC107Q8WV48 283 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 ANKRD7Q92527 254 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 BCL2L2Q92843 193 aaPredicted RBP3.71□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF479Q96JC4 524 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 ALS2CR12Q96Q35 445 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 MYCBPQ99417 103 aaPredicted RBP3.71□□□□□ -1.82
SMCO3-201ENST00000316048 CARD6Q9BX69 1037 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 PRDM4Q9UKN5 801 aa3.71□□□□□ -1.82
SMCO3-201ENST00000316048 DENND3A2RUS2 1198 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 PRR32B1ATL7 298 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SLC16A4O15374 487 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 LUC7L3O95232 432 aaKnown RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 PLEKP08567 350 aaPredicted RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 DLATP10515 647 aaKnown RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 CETPP11597 493 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 STMN1P16949 149 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 EPORP19235 508 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 HSD17B3P37058 310 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 OR3A1P47881 315 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 HTR6P50406 440 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 VAMP7P51809 220 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SNU13P55769 128 aaKnown RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 PRKCEQ02156 737 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SP4Q02446 784 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 NCBP1Q09161 790 aaKnown RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SGCBQ16585 318 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 WHAMMP3Q1A5X7 153 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 ANKRD33Q7Z3H0 272 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 CROCCP3Q8IVE0 287 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 NDUFAF2Q8N183 169 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 FAM133AQ8N9E0 248 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 TMEM161BQ8NDZ6 487 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 LPCAT1Q8NF37 534 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 LNX1Q8TBB1 728 aaPredicted RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF473Q8WTR7 871 aaKnown RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 AP2M1Q96CW1 435 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 BICD1Q96G01 975 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 RPGRIP1Q96KN7 1286 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SPATA13Q96N96 652 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 PSD2Q9BQI7 771 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 RTP3Q9BQQ7 232 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 PI4K2AQ9BTU6 479 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 GANQ9H2C0 597 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 AZI2Q9H6S1 392 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 DNAJC11Q9NVH1 559 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 GCNT4Q9P109 453 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 VPS18Q9P253 973 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 GMEB2Q9UKD1 530 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 FBXW2Q9UKT8 454 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SAR1BQ9Y6B6 198 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 PARP14Q460N5 1801 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 IGSF9BQ9UPX0 1349 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 RLFQ13129 1914 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 COL11A1P12107 1806 aaPredicted RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 IGKV6D-21A0A0A0MT36 114 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 MACROD2A1Z1Q3 448 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 CTAGE15A4D2H0 777 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 TMEM150BA6NC51 233 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 ASB14A6NK59 587 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 K7ERI5 159 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 CTSVO60911 334 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 RPS6KA5O75582 802 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 BCAS2O75934 225 aaPredicted RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 DDHD2O94830 711 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 GLCEO94923 617 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 STBD1O95210 358 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 PPP1R3DO95685 299 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 CTNNB1P35222 781 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 CLK1P49759 484 aaKnown RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SEC61A1P61619 476 aaKnown RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 FKBP1BP68106 108 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 MYL7Q01449 175 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 GFPT1Q06210 699 aaPredicted RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 CKAP4Q07065 602 aaKnown RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 ENPEPQ07075 957 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 TRAF2Q12933 501 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 RPS6KA1Q15418 735 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 DCAF10Q5QP82 559 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 METTL7BQ6UX53 244 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 KCTD8Q6ZWB6 473 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 MOB2Q70IA6 237 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 CTAGE6Q86UF2 777 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SERPINA12Q8IW75 414 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms