RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TISP43B9A030 160 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 WASH3PC4AMC7 463 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 M6PRP20645 277 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SOX11P35716 441 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 MAGEA12P43365 314 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SLC6A8P48029 635 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 DECR1Q16698 335 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SFT2D3Q587I9 215 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 WASH2PQ6VEQ5 465 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 GOLGA7Q7Z5G4 137 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PDZD9Q8IXQ8 264 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 EFCAB3Q8N7B9 438 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TCEAL3Q969E4 200 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 MAELQ96JY0 434 aaKnown RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PLCXD1Q9NUJ7 323 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 MAU2Q9Y6X3 613 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PDYNP01213 254 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 NAT2P11245 290 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TAS2R50P59544 299 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SNTA1Q13424 505 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 HENMT1Q5T8I9 393 aaKnown RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 AWAT2Q6E213 333 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TRAPPC12Q8WVT3 735 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF689Q96CS4 500 aaPredicted RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 MGLLQ99685 303 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ARHGAP39Q9C0H5 1083 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 WDR6Q9NNW5 1121 aaKnown RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ENPP4Q9Y6X5 453 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PAPPA2Q9BXP8 1791 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SCN10AQ9Y5Y9 1956 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 A0A0J9YVX5 310 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TMEM150CB9EJG8 249 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF821O75541 412 aaPredicted RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SEC14L2O76054 403 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 MELKQ14680 651 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SF1Q15637 639 aaKnown RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 MAPK14Q16539 360 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 GPRC6AQ5T6X5 926 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF691Q5VV52 312 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 GPR139Q6DWJ6 353 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SLC39A4Q6P5W5 647 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PGBD3Q8N328 593 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 OR56A3Q8NH54 315 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TAPBPLQ9BX59 468 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 KLF15Q9UIH9 416 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PADI2Q9Y2J8 665 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 FRMPD3Q5JV73 1810 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 GJE1A6NN92 205 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SIM2Q14190 667 aaPredicted RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 GPR153Q6NV75 609 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 RANBP10Q6VN20 620 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 OR14K1Q8NGZ2 314 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF563Q8TA94 476 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF431Q8TF32 576 aaPredicted RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 NUS1Q96E22 293 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PPA2Q9H2U2 334 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TOR1AO14656 332 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 OR2B3O76000 313 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 MS4A13Q5J8X5 152 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TEX26Q8N6G2 289 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 CELF5Q8N6W0 485 aaKnown RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF461Q8TAF7 563 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PSMG2Q969U7 264 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 CEP41Q9BYV8 373 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 THSD1Q9NS62 852 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 HMX3A6NHT5 357 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PLD2O14939 933 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 SCGB2A1O75556 95 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 CPN2P22792 545 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 LARP4Q71RC2 724 aaKnown RBP eCLIP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ASB17Q8WXJ9 295 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 SPACA7Q96KW9 195 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 TMPRSS11EQ9UL52 423 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 AGAP5A6NIR3 686 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 INMT-MINDY4F8WBC2 141 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 HAS3O00219 553 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 SYT5O00445 386 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 MID1O15344 667 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ADAM23O75077 832 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 OSMP13725 252 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 BDH1Q02338 343 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 DSC2Q02487 901 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 LRRC69Q6ZNQ3 347 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 CEP68Q76N32 757 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PHTF2Q8N3S3 785 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 CHDHQ8NE62 594 aaPredicted RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 OR10T2Q8NGX3 314 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 C1orf216Q8TAB5 229 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PPP1R14AQ96A00 147 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ACP6Q9NPH0 428 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PRDM9Q9NQV7 894 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ALPK2Q86TB3 2170 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 SLC38A8A6NNN8 435 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 H0Y858 1186 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 H3BSA7 217 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 S1PR1P21453 382 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 OR3A3P47888 321 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms