RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 C19orf43Q9BQ61 176 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 AARSD1Q9BTE6 412 aaKnown RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 OSBPL10Q9BXB5 764 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ZYG11BQ9C0D3 744 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ALG9Q9H6U8 611 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 RPF2Q9H7B2 306 aaKnown RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF703Q9H7S9 590 aaPredicted RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 ERVMER34-1Q9H9K5 563 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 GPN2Q9H9Y4 310 aaPredicted RBP4.7□□□□□ -1.66
CKS1B-201ENST00000308987 USE1Q9NZ43 259 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 MAGEL2Q9UJ55 1249 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 CDC42EP3Q9UKI2 254 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 FZD4Q9ULV1 537 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 CLCA2Q9UQC9 943 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 SNX10Q9Y5X0 201 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 NPFFR2Q9Y5X5 522 aa4.7□□□□□ -1.66
CKS1B-201ENST00000308987 EDDM13A0A1B0GTR0 161 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CCDC162PA2VCL2 907 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 LRRC72A6NJI9 287 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SAC3D1A6NKF1 404 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 H3BMQ9 156 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CD3EAPO15446 510 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 RRP8O43159 456 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PRODHO43272 600 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PLRG1O43660 514 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 MRPS14O60783 128 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SLC22A3O75751 556 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SEC14L2O76054 403 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CTSLP07711 333 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SRPRAP08240 638 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 MMP2P08253 660 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 RAP2AP10114 183 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 MTHFD2P13995 350 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 HGFP14210 728 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PORP16435 677 aaPredicted RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ATF4P18848 351 aaPredicted RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CCNA2P20248 432 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 MSH3P20585 1137 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 DGKAP23743 735 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 GSTM2P28161 218 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 MEOX1P50221 254 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ALDH3A2P51648 485 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PSMD7P51665 324 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 HNRNPFP52597 415 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 STC1P52823 247 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 TBX4P57082 545 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ECT2LQ008S8 904 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 LIPEQ05469 1076 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 RAD51Q06609 339 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PRKG2Q13237 762 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SRSF6Q13247 344 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 MAD2L1Q13257 205 aaPredicted RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PMS2P3Q13401 168 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ILKQ13418 452 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 TMED1Q13445 227 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 IL18R1Q13478 541 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SERINC3Q13530 473 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 NFYCQ13952 458 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 FGL2Q14314 439 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 RAB39AQ14964 217 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 C16orf72Q14CZ0 275 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CYP51A1Q16850 503 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 RFX4Q33E94 735 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 INAVAQ3KP66 663 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 VPS26BQ4G0F5 336 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 FAM98BQ52LJ0 330 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF789Q5FWF6 425 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ZC3H12BQ5HYM0 836 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SIRPB2Q5JXA9 342 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 TPRG1LQ5T0D9 272 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PIP5KL1Q5T9C9 394 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 BROXQ5VW32 411 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 KIAA1614Q5VZ46 1190 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CLEC6AQ6EIG7 209 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CXorf57Q6NSI4 855 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF549Q6P9A3 640 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 TMEM207Q6UWW9 146 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 TFAP2DQ7Z6R9 452 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 GLCCI1Q86VQ1 547 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 RIMKLAQ8IXN7 391 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SLC22A18ASQ8N1D0 253 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SVOPLQ8N434 492 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 FBXO39Q8N4B4 442 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SPATA6LQ8N4H0 392 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 EXD3Q8N9H8 876 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ZBTB8BQ8NAP8 495 aaPredicted RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 HJURPQ8NCD3 748 aaPredicted RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 DDHD1Q8NEL9 900 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 OR8J3Q8NGG0 315 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 OR56A4Q8NGH8 313 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 OR9I1Q8NGQ6 314 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 OR4L1Q8NH43 312 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 OR4C6Q8NH72 309 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ARRDC2Q8TBH0 407 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D15Q8TC07 691 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CHPT1Q8WUD6 406 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SNRNP27Q8WVK2 155 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ISG20Q96AZ6 181 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PTERQ96BW5 349 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D20Q96BZ9 403 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms