RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 NIPSNAP1Q9BPW8 284 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 EFCAB11Q9BUY7 163 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 RDH8Q9NYR8 311 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
SEC23A-201ENST00000307712 TNFRSF10BO14763 440 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 CAPN5O15484 640 aaPredicted RBP12.9□□□□□ -0.34
SEC23A-201ENST00000307712 KHDRBS3O75525 346 aaKnown RBP12.9□□□□□ -0.34
SEC23A-201ENST00000307712 TOXO94900 526 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 KCNK2O95069 426 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 PIK3CBP42338 1070 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 STK19P49842 368 aaPredicted RBP12.9□□□□□ -0.34
SEC23A-201ENST00000307712 GATMP50440 423 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 CDC20Q12834 499 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 GNA13Q14344 377 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 PRSS36Q5K4E3 855 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 MACC1Q6ZN28 852 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 Q6ZVU0 165 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 GDPD1Q8N9F7 314 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 PIGXQ8TBF5 258 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 AKAP1Q92667 903 aaKnown RBP eCLIP12.9□□□□□ -0.34
SEC23A-201ENST00000307712 RAD51AP1Q96B01 352 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 AIF1LQ9BQI0 150 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 ABCG5Q9H222 651 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 OSGIN1Q9UJX0 560 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 OAZ2O95190 189 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 IGLV3-25P01717 112 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 SLC19A1P41440 591 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 AVPR1BP47901 424 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 CAV3P56539 151 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 RPA4Q13156 261 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 NUMA1Q14980 2115 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 CDK10Q15131 360 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 TATDN3Q17R31 274 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 MSANTD1Q6ZTZ1 278 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 TRIM46Q7Z4K8 759 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 ZNF438Q7Z4V0 828 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 KLHL36Q8N4N3 616 aa12.9□□□□□ -0.34
SEC23A-201ENST00000307712 TTYH1Q9H313 450 aaPredicted RBP12.9□□□□□ -0.34
SEC23A-201ENST00000307712 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.35
SEC23A-201ENST00000307712 MAN2A2P49641 1150 aa12.9□□□□□ -0.35
SEC23A-201ENST00000307712 RAB8AP61006 207 aa12.9□□□□□ -0.35
SEC23A-201ENST00000307712 MC1RQ01726 317 aa12.9□□□□□ -0.35
SEC23A-201ENST00000307712 XKRXQ6PP77 449 aa12.9□□□□□ -0.35
SEC23A-201ENST00000307712 CELF5Q8N6W0 485 aaKnown RBP12.9□□□□□ -0.35
SEC23A-201ENST00000307712 ZBED6CLQ96FA7 236 aaPredicted RBP12.9□□□□□ -0.35
SEC23A-201ENST00000307712 ZSCAN5AQ9BUG6 496 aa12.9□□□□□ -0.35
SEC23A-201ENST00000307712 RLIMQ9NVW2 624 aa12.9□□□□□ -0.35
SEC23A-201ENST00000307712 PHF11Q9UIL8 331 aa12.9□□□□□ -0.35
SEC23A-201ENST00000307712 GPR52Q9Y2T5 361 aa12.9□□□□□ -0.35
SEC23A-201ENST00000307712 TMEM98Q9Y2Y6 226 aa12.9□□□□□ -0.35
SEC23A-201ENST00000307712 KLK4Q9Y5K2 254 aa12.9□□□□□ -0.35
SEC23A-201ENST00000307712 KNL1Q8NG31 2342 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 SMAD6O43541 496 aaKnown RBP12.89□□□□□ -0.35
SEC23A-201ENST00000307712 PQBP1O60828 265 aaKnown RBP12.89□□□□□ -0.35
SEC23A-201ENST00000307712 PCDH8O95206 1070 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 STOMP27105 288 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 ACSL1P33121 698 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 STAT5AP42229 794 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 CENPAP49450 140 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 PPP3R1P63098 170 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 CNIH2Q6PI25 160 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 SERPINA13PQ6UXR4 307 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 ADGRD2Q7Z7M1 963 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 SERINC5Q86VE9 423 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 CMTM8Q8IZV2 173 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 OR6C4Q8NGE1 309 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 SLC35B4Q969S0 331 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 ZNF566Q969W8 418 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 SLC12A9Q9BXP2 914 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 PPT2Q9UMR5 302 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 ZFR2Q9UPR6 939 aaKnown RBP12.89□□□□□ -0.35
SEC23A-201ENST00000307712 SBF2Q86WG5 1849 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 TAF1LQ8IZX4 1826 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 PEX11BO96011 259 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 HOXD8P13378 290 aaPredicted RBP12.89□□□□□ -0.35
SEC23A-201ENST00000307712 ELNP15502 786 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 NDUFAF6Q330K2 333 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 SPRYD7Q5W111 196 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 DNAJB7Q7Z6W7 309 aaPredicted RBP12.89□□□□□ -0.35
SEC23A-201ENST00000307712 CHPFQ8IZ52 775 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 PLSCR3Q9NRY6 295 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 CD8B2A6NJW9 211 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 FAM170BA6NMN3 283 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 FAM227AF5H4B4 570 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 LYRM1O43325 122 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 IFNA7P01567 189 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 IL3P08700 152 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 CD8BP10966 210 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 HLA-EP13747 358 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 PCMT1P22061 227 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 PCGF2P35227 344 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 SLC11A1P49279 550 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 RPS26P11Q5JNZ5 115 aaPredicted RBP12.89□□□□□ -0.35
SEC23A-201ENST00000307712 APCDD1Q8J025 514 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 TOMM5Q8N4H5 51 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 SAMD12Q8N8I0 201 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 GPR26Q8NDV2 337 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 OR52N2Q8NGI0 321 aa12.89□□□□□ -0.35
SEC23A-201ENST00000307712 CIDECQ96AQ7 238 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms