RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 HTR1AP08908 422 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 CLUP10909 449 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 DRD2P14416 443 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 RPS15AP62244 130 aaKnown RBP15.3■□□□□ 0.04
USP42-201ENST00000306177 KLHL26Q53HC5 615 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 CATSPEREQ5SY80 951 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 MANEALQ5VSG8 457 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 UNC5DQ6UXZ4 953 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 GOLM1Q8NBJ4 401 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 ERMAPQ96PL5 475 aaPredicted RBP15.3■□□□□ 0.04
USP42-201ENST00000306177 MEMO1Q9Y316 297 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 WASHC1A8K0Z3 465 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 WASH3PC4AMC7 463 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 SNAP29O95721 258 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 HEXBP07686 556 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 C5AR1P21730 350 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 MAPK3P27361 379 aaPredicted RBP15.3■□□□□ 0.04
USP42-201ENST00000306177 SLC15A1P46059 708 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 SH3BP2P78314 561 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 ADAM15Q13444 863 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 TMEM35AQ53FP2 167 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 WASH2PQ6VEQ5 465 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 GID4Q8IVV7 300 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 ZNF548Q8NEK5 533 aaPredicted RBP15.3■□□□□ 0.04
USP42-201ENST00000306177 PCDHGA10Q9Y5H3 936 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 SRCP12931 536 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 DEFB134Q4QY38 66 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 KIAA0319Q5VV43 1072 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 ZNF101Q8IZC7 436 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 LNX2Q8N448 690 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 RBCK1Q9BYM8 510 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 IGSF5Q9NSI5 407 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 ZBTB42B2RXF5 422 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 TEX46H3BTG2 121 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 S100A1P23297 94 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 GABRA3P34903 492 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 GMPRP36959 345 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 SLC35F1Q5T1Q4 408 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 RASGEF1AQ8N9B8 481 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 EZH1Q92800 747 aaPredicted RBP15.29■□□□□ 0.04
USP42-201ENST00000306177 DMRTB1Q96MA1 342 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 BARD1Q99728 777 aaKnown RBP15.29■□□□□ 0.04
USP42-201ENST00000306177 PCDHGB2Q9Y5G2 931 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 VILLO15195 856 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 PROM1O43490 865 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 PGAM2P15259 253 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 RPS3P23396 243 aaKnown RBP eCLIP15.29■□□□□ 0.04
USP42-201ENST00000306177 VIPR2P41587 438 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 MLLT1Q03111 559 aaPredicted RBP15.29■□□□□ 0.04
USP42-201ENST00000306177 ZNF613Q6PF04 617 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 LRRC25Q8N386 305 aaPredicted RBP15.29■□□□□ 0.04
USP42-201ENST00000306177 JAGN1Q8N5M9 183 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 PTCHD1Q96NR3 888 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 BOCQ9BWV1 1114 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 MKLN1Q9UL63 735 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 A0A1B0GVT2 93 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 SCAMP2O15127 329 aaKnown RBP15.29■□□□□ 0.04
USP42-201ENST00000306177 ELK4P28324 431 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 CHAF1BQ13112 559 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 SLC27A4Q6P1M0 643 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 P4HA3Q7Z4N8 544 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 OR6N1Q8NGY5 312 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 ZNF420Q8TAQ5 688 aaPredicted RBP15.29■□□□□ 0.04
USP42-201ENST00000306177 THRSPQ92748 146 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 SH3YL1Q96HL8 342 aaPredicted RBP15.29■□□□□ 0.04
USP42-201ENST00000306177 RBP7Q96R05 134 aa15.29■□□□□ 0.04
USP42-201ENST00000306177 CLPXO76031 633 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 RPS3AP61247 264 aaKnown RBP15.28■□□□□ 0.04
USP42-201ENST00000306177 EXOC3L2Q2M3D2 409 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 ABCA11PQ4W5N1 156 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 C4orf46Q504U0 113 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 ZNF782Q6ZMW2 699 aaPredicted RBP15.28■□□□□ 0.04
USP42-201ENST00000306177 ZNF227Q86WZ6 799 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 METTL27Q8N6F8 245 aaPredicted RBP15.28■□□□□ 0.04
USP42-201ENST00000306177 FAM86B1Q8N7N1 296 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 ACOT12Q8WYK0 555 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 CMKLR1Q99788 373 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 METTL21EPA6NDL7 271 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 PLOD2O00469 737 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 NTSR1P30989 418 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 ADAM17P78536 824 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 MOGQ16653 247 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 MSANTD1Q6ZTZ1 278 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 ARFGAP1Q8N6T3 406 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 ANKFN1Q8N957 763 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 HSPBAP1Q96EW2 488 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 MAGIXQ9H6Y5 334 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 ZNF304Q9HCX3 659 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 LAMP5Q9UJQ1 280 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 G3V2L1 256 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 TIMP1P01033 207 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 PRSS56P0CW18 603 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 ADRB3P13945 408 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 GADD45AP24522 165 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 C6orf120Q7Z4R8 191 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 CEP76Q8TAP6 659 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 SLC12A9Q9BXP2 914 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 TMEM189-UBE2V1I3L0A0 370 aa15.28■□□□□ 0.04
USP42-201ENST00000306177 RLN2P04090 185 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms