RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 UGT8Q16880 541 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 PRAMEF20Q5VT98 475 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 OR4C11Q6IEV9 310 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 LRRC18Q8N456 261 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 OR51L1Q8NGJ5 315 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 SLC25A44Q96H78 314 aaPredicted RBP7.49□□□□□ -1.21
SCN9A-201ENST00000303354 ULBP3Q9BZM4 244 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 MRM3Q9HC36 420 aaKnown RBP7.49□□□□□ -1.21
SCN9A-201ENST00000303354 ROBO3Q96MS0 1386 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 H1F0P07305 194 aaKnown RBP7.49□□□□□ -1.21
SCN9A-201ENST00000303354 CDKN2DP55273 166 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 CDH15P55291 814 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 SLC25A11Q02978 314 aaKnown RBP7.49□□□□□ -1.21
SCN9A-201ENST00000303354 PPA1Q15181 289 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 RAB11FIP2Q7L804 512 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 TCEAL8Q8IYN2 117 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 BATF2Q8N1L9 274 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 ZFP41Q8N8Y5 198 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 C12orf4Q9NQ89 552 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 DNMT3BQ9UBC3 853 aaKnown RBP7.49□□□□□ -1.21
SCN9A-201ENST00000303354 HTR3EA5X5Y0 456 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 FABP12A6NFH5 140 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 AIREO43918 545 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF217O75362 1048 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 RDH16O75452 317 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 RGS21Q2M5E4 152 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 KIAA0930Q6ICG6 404 aaPredicted RBP7.49□□□□□ -1.21
SCN9A-201ENST00000303354 KLHL36Q8N4N3 616 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 OR9K2Q8NGE7 335 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 OR51G2Q8NGK0 314 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 HCFC2Q9Y5Z7 792 aa7.49□□□□□ -1.21
SCN9A-201ENST00000303354 SHISA7A6NL88 538 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 SMAD6O43541 496 aaKnown RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 PFKLP17858 780 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 PSMA1P25786 263 aaKnown RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 SOX3P41225 446 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 ILF2Q12905 390 aaKnown RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 TMEM35AQ53FP2 167 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 SPIN4Q56A73 249 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 RABL3Q5HYI8 236 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 FIP1L1Q6UN15 594 aaKnown RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 GALNT6Q8NCL4 622 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 OR5M1Q8NGP8 315 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 CIDECQ96AQ7 238 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 SLC7A6OSQ96CW6 309 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 SGCZQ96LD1 299 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 OSBPL11Q9BXB4 747 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 GPN1Q9HCN4 374 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 SATB2Q9UPW6 733 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 CAPN5O15484 640 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 IL32P24001 234 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 SDC2P34741 201 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 EEF1A1P68104 462 aaKnown RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 FAM189BP81408 668 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 MAD2L1BPQ15013 274 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 MSANTD1Q6ZTZ1 278 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 RFKQ969G6 155 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 TNFRSF10DQ9UBN6 386 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 RSL24D1Q9UHA3 163 aaKnown RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 CFL2Q9Y281 166 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 MED16Q9Y2X0 877 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 PCDHGA8Q9Y5G5 932 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 EI24O14681 340 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 GKN3PP0CG01 181 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 C5AR1P21730 350 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 IRS1P35568 1242 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 GABRA2P47869 451 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 GAS6Q14393 721 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 VASH1Q7L8A9 365 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 HOMEZQ8IX15 550 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 OR6Q1Q8NGQ2 317 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 OR13C3Q8NGS6 347 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 C1QTNF6Q9BXI9 259 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 GLS2Q9UI32 602 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 DLX3O60479 287 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 CD2P06729 351 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 ACVR1BP36896 505 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 LEPRP48357 1165 aaKnown RBP7.48□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF84P51523 738 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 GXYLT1Q4G148 440 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 BBS10Q8TAM1 723 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF778Q96MU6 729 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 SNED1Q8TER0 1413 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 HSPB6O14558 160 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 AHCYL1O43865 530 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 APBB3O95704 486 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 CLIC3O95833 236 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 TSHRP16473 764 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 VAMP1P23763 118 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 CERS1P27544 350 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 HTR7P34969 479 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 SIRPAP78324 504 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 CLECL1Q8IZS7 167 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 SLC46A2Q9BY10 475 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 ASB6Q9NWX5 421 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 PCDHB10Q9UN67 800 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 PSAT1Q9Y617 370 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 ACOT7O00154 380 aa7.48□□□□□ -1.21
SCN9A-201ENST00000303354 DPP4P27487 766 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms