RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 CLCA4Q14CN2 919 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 IRF2BPLQ9H1B7 796 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 COL2A1P02458 1487 aaPredicted RBP20.22■□□□□ 0.83
LETM1-201ENST00000302787 CELP19835 753 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 CRISP1P54107 249 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 CHAF1BQ13112 559 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 CTC1Q2NKJ3 1217 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 GTF2IRD2BQ6EKJ0 949 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 GTF2IRD2Q86UP8 949 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 HMGCLP35914 325 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 RPL6Q02878 288 aaKnown RBP20.22■□□□□ 0.83
LETM1-201ENST00000302787 SMU1Q2TAY7 513 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 RANBP10Q6VN20 620 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 SPATC1Q76KD6 591 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 SLC9B2Q86UD5 537 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 SDHAF3Q9NRP4 125 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 AVL9Q8NBF6 648 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 PGAP3Q96FM1 320 aaPredicted RBP20.22■□□□□ 0.83
LETM1-201ENST00000302787 LRIG1Q96JA1 1093 aa20.22■□□□□ 0.83
LETM1-201ENST00000302787 K7ERQ8 282 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 SCAMP2O15127 329 aaKnown RBP20.21■□□□□ 0.83
LETM1-201ENST00000302787 IQCF3P0C7M6 154 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 BMP2P12643 396 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 POLR2CP19387 275 aaPredicted RBP20.21■□□□□ 0.83
LETM1-201ENST00000302787 HOXC12P31275 282 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 ARPC4P59998 168 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 ERVPABLB-1P60509 514 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.21■□□□□ 0.833e-12■■■■■ 30.3
LETM1-201ENST00000302787 EXTL2Q9UBQ6 330 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 MYH10P35580 1976 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 SLC1A7O00341 560 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 FOXD2O60548 495 aaPredicted RBP20.21■□□□□ 0.83
LETM1-201ENST00000302787 KAT7O95251 611 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 GP1BBP13224 206 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 PRKCDQ05655 676 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 LSAMPQ13449 338 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 TAS2R10Q9NYW0 307 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 LAMP5Q9UJQ1 280 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 ZSCAN5BA6NJL1 495 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 A8MV72 311 aaPredicted RBP20.21■□□□□ 0.83
LETM1-201ENST00000302787 SORBS2O94875 1100 aaKnown RBP20.21■□□□□ 0.83
LETM1-201ENST00000302787 APOL3O95236 402 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 STSP08842 583 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 PUS10Q3MIT2 529 aaKnown RBP20.21■□□□□ 0.83
LETM1-201ENST00000302787 TMEM40Q8WWA1 233 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 NXPE2Q96DL1 559 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 SCGB3A2Q96PL1 93 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 LRRN3E7EW58 273 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 ASGR2P07307 311 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 RHCEP18577 417 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 GRM2Q14416 872 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.21■□□□□ 0.838e-7■■■■□ 22.6
LETM1-201ENST00000302787 EOGTQ5NDL2 527 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 NEIL3Q8TAT5 605 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 LRRN3Q9H3W5 708 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 METTL8Q9H825 291 aaKnown RBP20.21■□□□□ 0.83
LETM1-201ENST00000302787 C14orf119Q9NWQ9 140 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 HSPB11Q9Y547 144 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 PCDHGA3Q9Y5H0 932 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 PCDHGA2Q9Y5H1 932 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 MYH11P35749 1972 aa20.21■□□□□ 0.83
LETM1-201ENST00000302787 CDKL1Q00532 357 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 NUP43Q8NFH3 380 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 OR2T33Q8NG76 320 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 HOXD8P13378 290 aaPredicted RBP20.2■□□□□ 0.82
LETM1-201ENST00000302787 GSTM2P28161 218 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 HTR6P50406 440 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 MS4A2Q01362 244 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 DEFA5Q01523 94 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 FLYWCH1Q4VC44 716 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 SAMD12Q8N8I0 201 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 MGLLQ99685 303 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 RNF121Q9H920 327 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 ZNF304Q9HCX3 659 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 HSPE1-MOB4S4R3N1 261 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 EPCAMP16422 314 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 GADD45AP24522 165 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 C6orf183Q5T699 404 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 FUNDC2Q9BWH2 189 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 ALKBH4Q9NXW9 302 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 SARDHQ9UL12 918 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 ZNF878C9JN71 531 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 INMT-MINDY4F8WBC2 141 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 UGT8Q16880 541 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 TBRG1Q3YBR2 411 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 ARHGAP40Q5TG30 622 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 B3GNT9Q6UX72 402 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 TMED4Q7Z7H5 227 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 OR8J1Q8NGP2 316 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 HUS1BQ8NHY5 278 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 KLRF1Q9NZS2 232 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 TRAV6A0A075B6T7 132 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 L7N2F9 121 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 BPIP17213 487 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 TYRP1P17643 537 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 CAPN3P20807 821 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 CGB2Q6NT52 195 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 IL17FQ96PD4 163 aa20.2■□□□□ 0.82
LETM1-201ENST00000302787 UNC119BA6NIH7 251 aa20.19■□□□□ 0.82
LETM1-201ENST00000302787 KIAA0513O60268 411 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms