RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 MRPL46Q9H2W6 279 aaKnown RBP10.51□□□□□ -0.73
CLCC1-201ENST00000302500 NOL11Q9H8H0 719 aaKnown RBP10.51□□□□□ -0.73
CLCC1-201ENST00000302500 ATG4BQ9Y4P1 393 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 TNPO3Q9Y5L0 923 aaKnown RBP10.51□□□□□ -0.73
CLCC1-201ENST00000302500 FBN2P35556 2912 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 PCNX1Q96RV3 2341 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 A0A1W2PPM1 405 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 A0A1W2PS29 197 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 WASHC1A8K0Z3 465 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 PROM1O43490 865 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 B3GALT2O43825 422 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 FGF17O60258 216 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 ZNF500O60304 480 aaPredicted RBP10.5□□□□□ -0.73
CLCC1-201ENST00000302500 DLX3O60479 287 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 F10P00742 488 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 GFAPP14136 432 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 MST1P26927 711 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 TPP2P29144 1249 aaPredicted RBP10.5□□□□□ -0.73
CLCC1-201ENST00000302500 NEK2P51955 445 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 GALNT1Q10472 559 aaPredicted RBP10.5□□□□□ -0.73
CLCC1-201ENST00000302500 TBL3Q12788 808 aaKnown RBP10.5□□□□□ -0.73
CLCC1-201ENST00000302500 NR6A1Q15406 480 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 ZRSR2Q15696 482 aaKnown RBP10.5□□□□□ -0.73
CLCC1-201ENST00000302500 ZNF678Q5SXM1 525 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 OR4C11Q6IEV9 310 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 SIAH3Q8IW03 269 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 FAM26EQ8N5C1 309 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 ZNF321PQ8N8H1 164 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 OR4F6Q8NGB9 312 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 ACMSDQ8TDX5 336 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 UBE2E3Q969T4 207 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 PHF21BQ96EK2 531 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 L3HYPDHQ96EM0 354 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 MTERF1Q99551 399 aaKnown RBP10.5□□□□□ -0.73
CLCC1-201ENST00000302500 ILKAPQ9H0C8 392 aaPredicted RBP10.5□□□□□ -0.73
CLCC1-201ENST00000302500 MAP10Q9P2G4 905 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 CPSF2Q9P2I0 782 aaKnown RBP10.5□□□□□ -0.73
CLCC1-201ENST00000302500 ADGRE2Q9UHX3 823 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 ERRFI1Q9UJM3 462 aaPredicted RBP10.5□□□□□ -0.73
CLCC1-201ENST00000302500 TMCO1Q9UM00 188 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 PCDHGA11Q9Y5H2 935 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 NCKAP5O14513 1909 aa10.5□□□□□ -0.73
CLCC1-201ENST00000302500 ZNF407Q9C0G0 2248 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 DCHS2Q6V1P9 2916 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 TRAV17A0A0B4J275 112 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 A0A1W2PR48 441 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 SAP18O00422 153 aaKnown RBP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 UBFD1O14562 309 aaKnown RBP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 PRAMEF2O60811 474 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 LDB3O75112 727 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 PRKRAO75569 313 aaKnown RBP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 SEMA3DO95025 777 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 CLDN9O95484 217 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 LDLRP01130 860 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 S100BP04271 92 aaPredicted RBP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 HSD17B3P37058 310 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 PIK3CGP48736 1102 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 ST13P50502 369 aaKnown RBP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 VSNL1P62760 191 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 AP2B1P63010 937 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 HERVK_113P63132 956 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 TNFRSF17Q02223 184 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 ZNF33BQ06732 778 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 ELAVL1Q15717 326 aaKnown RBP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 CPSF6Q16630 551 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 RNFT1Q5M7Z0 435 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 MFSD4BQ5TF39 518 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 FRG2Q64ET8 278 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 C18orf63Q68DL7 685 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 KLC3Q6P597 504 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 MYRIPQ8NFW9 859 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 OR1N1Q8NGS0 311 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 ZNF721Q8TF20 911 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 AENQ8WTP8 325 aaKnown RBP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 NR4A3Q92570 626 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 NTNG2Q96CW9 530 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 ZNF354BQ96LW1 612 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 FRMD6Q96NE9 622 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 FRG2BQ96QU4 278 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 ERVK-6Q9BXR3 956 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 GSTO2Q9H4Y5 243 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 ACTR8Q9H981 624 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 TNFRSF12AQ9NP84 129 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 ADAP2Q9NPF8 381 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 PRTFDC1Q9NRG1 225 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 FARSBQ9NSD9 589 aaKnown RBP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 STMN3Q9NZ72 180 aa10.49□□□□□ -0.73
CLCC1-201ENST00000302500 PSMC3IPQ9P2W1 217 aaPredicted RBP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 COPG1Q9Y678 874 aaKnown RBP10.49□□□□□ -0.73
CLCC1-201ENST00000302500 HRKO00198 91 aa10.48□□□□□ -0.73
CLCC1-201ENST00000302500 SH3BGRLO75368 114 aa10.48□□□□□ -0.73
CLCC1-201ENST00000302500 MYO1DO94832 1006 aa10.48□□□□□ -0.73
CLCC1-201ENST00000302500 PROCP04070 461 aa10.48□□□□□ -0.73
CLCC1-201ENST00000302500 NUDT17P0C025 328 aa10.48□□□□□ -0.73
CLCC1-201ENST00000302500 EDN3P14138 238 aa10.48□□□□□ -0.73
CLCC1-201ENST00000302500 HPDP32754 393 aaPredicted RBP10.48□□□□□ -0.73
CLCC1-201ENST00000302500 PRKAA2P54646 552 aa10.48□□□□□ -0.73
CLCC1-201ENST00000302500 CDH13P55290 713 aa10.48□□□□□ -0.73
CLCC1-201ENST00000302500 ARG2P78540 354 aa10.48□□□□□ -0.73
CLCC1-201ENST00000302500 HIST2H2ACQ16777 129 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms