RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TFGQ92734 400 aaPredicted RBP13.45□□□□□ -0.26
SDC2-201ENST00000302190 STOX2Q9P2F5 926 aaPredicted RBP13.45□□□□□ -0.26
SDC2-201ENST00000302190 SPATA2Q9UM82 520 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 KCNK6Q9Y257 313 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 CLCA3PQ9Y6N3 262 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 GMFGO60234 142 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 CRYZL1O95825 349 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 TIA1P31483 386 aaKnown RBP eCLIP13.45□□□□□ -0.263e-7■■■■□ 22.4
SDC2-201ENST00000302190 LIPAP38571 399 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 MVKQ03426 396 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 UGT8Q16880 541 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 PRAMEF14Q5SWL7 426 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 SLC35F1Q5T1Q4 408 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 UBE2UQ5VVX9 321 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 PRAMEF13Q5VWM6 474 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 PRR23CQ6ZRP0 262 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 GALNT7Q86SF2 657 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 ZSWIM9Q86XI8 627 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 GEMIN6Q8WXD5 167 aaKnown RBP13.45□□□□□ -0.26
SDC2-201ENST00000302190 TRIM63Q969Q1 353 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 UBE2E3Q969T4 207 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 CSF3RQ99062 836 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 PKMYT1Q99640 499 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 KLF16Q9BXK1 252 aaPredicted RBP13.45□□□□□ -0.26
SDC2-201ENST00000302190 SERHL2Q9H4I8 314 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 REEP4Q9H6H4 257 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 SERHLQ9NQF3 203 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 MAT2BQ9NZL9 334 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 DEC1Q9P2X7 70 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 CCL26Q9Y258 94 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 BOLA1Q9Y3E2 137 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 PDPK1O15530 556 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 SOCS5O75159 536 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 SOD2P04179 222 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 LHCGRP22888 699 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 CSNK1DP48730 415 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 HNRNPFP52597 415 aaKnown RBP13.45□□□□□ -0.26
SDC2-201ENST00000302190 C22orf42Q6IC83 251 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 GRASPQ7Z6J2 395 aaPredicted RBP13.45□□□□□ -0.26
SDC2-201ENST00000302190 METTL3Q86U44 580 aaKnown RBP13.45□□□□□ -0.26
SDC2-201ENST00000302190 SPERTQ8NA61 448 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 PAPD5Q8NDF8 572 aaKnown RBP13.45□□□□□ -0.26
SDC2-201ENST00000302190 NTMT1Q9BV86 223 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 NEK6Q9HC98 313 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 TDP1Q9NUW8 608 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 BRWD1Q9NSI6 2320 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 MUC3AQ02505 3323 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 WASH3PC4AMC7 463 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 FCER2P06734 321 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 OR12D1P0DN82 309 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 ITIH1P19827 911 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 CR2P20023 1033 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 NCBP2P52298 156 aaKnown RBP eCLIP13.44□□□□□ -0.261e-8■□□□□ 8.1
SDC2-201ENST00000302190 PPP5CP53041 499 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 RGS8P57771 180 aaPredicted RBP13.44□□□□□ -0.26
SDC2-201ENST00000302190 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.44□□□□□ -0.26
SDC2-201ENST00000302190 HEPACAMQ14CZ8 416 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 SLC5A12Q1EHB4 618 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 TPGS2Q68CL5 300 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 CYP4Z2PQ8N1L4 340 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 BADQ92934 168 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 GLYATL1Q969I3 302 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 SLC30A2Q9BRI3 323 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 SLC7A5P2Q9GIP4 190 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 TAS2R9Q9NYW1 312 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 CFL2Q9Y281 166 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 GFRA2O00451 464 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 HAT1O14929 419 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 KCNK5O95279 499 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 H1F0P07305 194 aaKnown RBP13.44□□□□□ -0.26
SDC2-201ENST00000302190 CCR4P51679 360 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 HOXC5Q00444 222 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 HNRNPA0Q13151 305 aaKnown RBP13.44□□□□□ -0.26
SDC2-201ENST00000302190 SPIN4Q56A73 249 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 MACC1Q6ZN28 852 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 WDR53Q7Z5U6 358 aaPredicted RBP13.44□□□□□ -0.26
SDC2-201ENST00000302190 B3GNT7Q8NFL0 401 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 USP7Q93009 1102 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 MUL1Q969V5 352 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 VWCEQ96DN2 955 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 C12orf66Q96MD2 445 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 BEX1Q9HBH7 125 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 QSOX1O00391 747 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 AP3D1O14617 1153 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 CBSLP0DN79 551 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 NAT2P11245 290 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 CD40LGP29965 261 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 CBSP35520 551 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 ID2Q02363 134 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 PRSS48Q7RTY5 328 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 CCDC116Q8IYX3 515 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 TMEM145Q8NBT3 493 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 DNAJB8Q8NHS0 232 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 TCEAL4Q96EI5 215 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 TEFMQ96QE5 360 aaKnown RBP13.44□□□□□ -0.26
SDC2-201ENST00000302190 NIPSNAP1Q9BPW8 284 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 SPRTNQ9H040 489 aaPredicted RBP13.44□□□□□ -0.26
SDC2-201ENST00000302190 ZC4H2Q9NQZ6 224 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 ZNF222Q9UK12 451 aa13.44□□□□□ -0.26
SDC2-201ENST00000302190 A0A1B0GVC2 190 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms