RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 FAM98AQ8NCA5 519 aaKnown RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 SLC5A11Q8WWX8 675 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 ZBED6CLQ96FA7 236 aaPredicted RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 VMP1Q96GC9 406 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 RBCK1Q9BYM8 510 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 CLEC4MQ9H2X3 399 aaPredicted RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 GORASP2Q9H8Y8 452 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 TDP1Q9NUW8 608 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 STOX2Q9P2F5 926 aaPredicted RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 LHX3Q9UBR4 397 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 ADAM30Q9UKF2 790 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 RPL36Q9Y3U8 105 aaKnown RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 FAM172BPA6NC97 362 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 ENTPD6O75354 484 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 SEMA3DO95025 777 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 IFNA16P05015 189 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 CTBSQ01459 385 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 SPIN4Q56A73 249 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 OXR1Q8N573 874 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 GOLM1Q8NBJ4 401 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 GLYATL1Q969I3 302 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 PPP1R14BQ96C90 147 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 TMCO6Q96DC7 493 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 TMEM19Q96HH6 336 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 CLSTN3Q9BQT9 956 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 ING3Q9NXR8 418 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 CNIH4Q9P003 139 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 TMED5Q9Y3A6 229 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 CKAP5Q14008 2032 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 FAM170BA6NMN3 283 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 QSOX1O00391 747 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 NDUFS4O43181 175 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 CD9P21926 228 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 SLC19A1P41440 591 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 SLC9A3P48764 834 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 EMP3P54852 163 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 SF3B4Q15427 424 aaKnown RBP eCLIP12.74□□□□□ -0.37
CASC4-201ENST00000299957 LCN1P1Q5VSP4 162 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 KIAA1324Q6UXG2 1013 aaKnown RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 NUDT18Q6ZVK8 323 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 OR51L1Q8NGJ5 315 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 LMLNQ96KR4 655 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 KCTD7Q96MP8 289 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 TM9SF2Q99805 663 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 EFCAB11Q9BUY7 163 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 NMNAT1Q9HAN9 279 aaPredicted RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 TMEM138Q9NPI0 162 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 RGS17Q9UGC6 210 aaPredicted RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 OR10H2O60403 315 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 IGLV3-25P01717 112 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 RPN2P04844 631 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 ITIH1P19827 911 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 AOAHP28039 575 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 HLA-FP30511 346 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 HOXC13P31276 330 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 VIPR2P41587 438 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 CRISP1P54107 249 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 NNATQ16517 81 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 PROX2Q3B8N5 592 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 XKR7Q5GH72 579 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 OR2G6Q5TZ20 316 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 CST9Q5W186 159 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 ARMC6Q6NXE6 501 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 OR6Q1Q8NGQ2 317 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 CXorf40BQ96DE9 158 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 CPPED1Q9BRF8 314 aaPredicted RBP12.73□□□□□ -0.37
CASC4-201ENST00000299957 ZNF334Q9HCZ1 680 aaPredicted RBP12.73□□□□□ -0.37
CASC4-201ENST00000299957 NECTIN3Q9NQS3 549 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 MRPL15Q9P015 296 aaKnown RBP12.73□□□□□ -0.37
CASC4-201ENST00000299957 WDR37Q9Y2I8 494 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 IFT52Q9Y366 437 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 PCM1Q15154 2024 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 TCRBV5S2A0A599 114 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 SEC14L2O76054 403 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 CBLP22681 906 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 PSMB5P28074 263 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 CDH11P55287 796 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 HYAL4Q2M3T9 481 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 C6orf120Q7Z4R8 191 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 NRARPQ7Z6K4 114 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 FAM46DQ8NEK8 389 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 OR6K6Q8NGW6 343 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 OR51A7Q8NH64 312 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 GPR151Q8TDV0 419 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 PIK3R3Q92569 461 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 GGHQ92820 318 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 TCEAL4Q96EI5 215 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 MBOAT4Q96T53 435 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 IFT27Q9BW83 186 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 MKLN1Q9UL63 735 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 CCL26Q9Y258 94 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 ANKRD33BA6NCL7 494 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 SCAMP2O15127 329 aaKnown RBP12.73□□□□□ -0.37
CASC4-201ENST00000299957 AQP9O43315 295 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 ADAM23O75077 832 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 SLITRK5O94991 958 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 SOX30O94993 753 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 TSPAN12O95859 305 aa12.73□□□□□ -0.37
CASC4-201ENST00000299957 PTRH1Q86Y79 214 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms