RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 PDLIM5Q96HC4 596 aaKnown RBP12.74□□□□□ -0.37
TNFRSF21-201ENST00000296861 CLSTN3Q9BQT9 956 aa12.74□□□□□ -0.37
TNFRSF21-201ENST00000296861 IRF2BPLQ9H1B7 796 aa12.74□□□□□ -0.37
TNFRSF21-201ENST00000296861 PLD2O14939 933 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 LEFTY1O75610 366 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 ALDH1A1P00352 501 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 IFNA14P01570 189 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 SRCP12931 536 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 CHMP24386 653 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 IL12RB1P42701 662 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 ARPC4P59998 168 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 GPAT3Q53EU6 434 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 MACC1Q6ZN28 852 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 NPAS4Q8IUM7 802 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 LILRB4Q8NHJ6 448 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 FCGR1BQ92637 280 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 TXNDC15Q96J42 360 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 HRASLS5Q96KN8 279 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 RACGAP1Q9H0H5 632 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 QRSL1Q9H0R6 528 aaKnown RBP12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 ABCG4Q9H172 646 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 SLC9A8Q9Y2E8 581 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 PCM1Q15154 2024 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 GPX5O75715 221 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 NCR1O76036 304 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 SLITRK5O94991 958 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 HMGA1P17096 107 aaKnown RBP12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 ITGA2P17301 1181 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 DDX5P17844 614 aaKnown RBP12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 PFN3P60673 137 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 TBPL1P62380 186 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 BCL2A1Q16548 175 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 C22orf39Q6P5X5 142 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 TRIM69Q86WT6 500 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 TSSK6Q9BXA6 273 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 STOX2Q9P2F5 926 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 A0A1W2PQL4 384 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 CYP17A1P05093 508 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 SELPP16109 830 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 ZNF45Q02386 682 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 MRPL28Q13084 256 aaKnown RBP12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 QPRTQ15274 297 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 BAK1Q16611 211 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 LRIF1Q5T3J3 769 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 CHST9Q7L1S5 443 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 CALHM3Q86XJ0 350 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 KRT73Q86Y46 540 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 NLGN4YQ8NFZ3 816 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 CLIP3Q96DZ5 547 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 F2RL3Q96RI0 385 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 WACQ9BTA9 647 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 FNDC11Q9BVV2 318 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 NKIRAS2Q9NYR9 191 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 ZNF282Q9UDV7 671 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 OSGIN1Q9UJX0 560 aa12.73□□□□□ -0.37
TNFRSF21-201ENST00000296861 MEN1O00255 615 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 HLA-FP30511 346 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 CSTF2P33240 577 aaKnown RBP eCLIP12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 SPINT3P49223 89 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 MAPK12P53778 367 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 CRISP1P54107 249 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 GRIN2CQ14957 1233 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 TEAD4Q15561 434 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 MICAQ29983 383 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 AGAP6Q5VW22 663 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 LYPLAL1Q5VWZ2 237 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 PPP2R2DQ66LE6 453 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 PNCKQ6P2M8 343 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 BRAT1Q6PJG6 821 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 KLK6Q92876 244 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 SCRN2Q96FV2 425 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 AGAP4Q96P64 663 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 ZNF226Q9NYT6 803 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 NLKQ9UBE8 527 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 GPSM3Q9Y4H4 160 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 PTTG1O95997 202 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 WASP42768 502 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 GPR1P46091 355 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 ASMTP46597 345 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 RORCP51449 518 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 DSTNP60981 165 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 CRB2Q5IJ48 1285 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 MTFR2Q6P444 385 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 ABI3BPQ7Z7G0 1075 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 FAM124AQ86V42 546 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 GANCQ8TET4 914 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 CASD1Q96PB1 797 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 ANKRA2Q9H9E1 313 aa12.72□□□□□ -0.37
TNFRSF21-201ENST00000296861 A0A1W2PPK0 400 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 GRXCR2A6NFK2 248 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 CLDN24A6NM45 220 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 H7C0S8 307 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 UGT2B17O75795 530 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 GPX2P18283 190 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 TIA1P31483 386 aaKnown RBP eCLIP12.71□□□□□ -0.375e-8■■■■■ 37.8
TNFRSF21-201ENST00000296861 SDC2P34741 201 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 WNT3P56703 355 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 IFITM2Q01629 132 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms