RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 VEPH1Q14D04 833 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 PTGES3Q15185 160 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 SEC23BQ15437 767 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 SSX1Q16384 188 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 BCL7AQ4VC05 210 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 SGO1Q5FBB7 561 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 ATXN7L2Q5T6C5 722 aaPredicted RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 PRAMEF8Q5VWM4 474 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 PRAMEF7Q5VXH5 474 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 PTCRAQ6ISU1 281 aaPredicted RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 CD200R1LQ6Q8B3 271 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 SLCO4C1Q6ZQN7 724 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 PRICKLE2Q7Z3G6 844 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 SPRED2Q7Z698 418 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 OR8J1Q8NGP2 316 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 KLHL6Q8WZ60 621 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 TRIM63Q969Q1 353 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 SLC25A46Q96AG3 418 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 TMEM80Q96HE8 168 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 ST6GAL2Q96JF0 529 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 KCNC2Q96PR1 638 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 PRRX2Q99811 253 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 CENPOQ9BU64 300 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 RUBCNLQ9H714 662 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 NT5DC2Q9H857 520 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 HHATLQ9HCP6 504 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 FGF20Q9NP95 211 aaPredicted RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 RASSF1Q9NS23 344 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 IMPAD1Q9NX62 359 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 ZSCAN32Q9NX65 697 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 TAS2R9Q9NYW1 312 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 STOX2Q9P2F5 926 aaPredicted RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 DKK3Q9UBP4 350 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 POU2F3Q9UKI9 436 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 DIMT1Q9UNQ2 313 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 MRPL42Q9Y6G3 142 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 ABHD14A-ACY1A0A1B0GW23 586 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 LINC01553A4QN01 128 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 PRAMEF25A6NGN4 478 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 GPR39O43194 453 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 HCN1O60741 890 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 CCNKO75909 580 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 RECKO95980 971 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 CATP04040 527 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 STSP08842 583 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 ANXA4P09525 319 aaPredicted RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 CTSAP10619 480 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 FUT4P22083 530 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 PSMA1P25786 263 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 TNFSF8P32971 234 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 NEK2P51955 445 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 OR2B6P58173 313 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 LSM3P62310 102 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 CDK6Q00534 326 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 FOXK2Q01167 660 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 PPP1R8Q12972 351 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 SYT16Q17RD7 645 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 EXOC3L2Q2M3D2 409 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 TMEM44Q2T9K0 475 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 C3orf38Q5JPI3 329 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 HENMT1Q5T8I9 393 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 MFSD4BQ5TF39 518 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 SAXO2Q658L1 398 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 MED27Q6P2C8 311 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 KLHL17Q6TDP4 642 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 LINGO4Q6UY18 593 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 GDPD4Q6W3E5 623 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 MBOAT1Q6ZNC8 495 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 RAB43Q86YS6 212 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 CLECL1Q8IZS7 167 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 NAGSQ8N159 534 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 FAM83FQ8NEG4 500 aaPredicted RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 OR7G3Q8NG95 312 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 ANGPTL6Q8NI99 470 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 MARVELD3Q96A59 401 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 SH3KBP1Q96B97 665 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 MRPL38Q96DV4 380 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 NEURL3Q96EH8 262 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 RNF170Q96K19 258 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 LINC00615Q96LM1 132 aaPredicted RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 GON7Q9BXV9 100 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 POLDIP3Q9BY77 421 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 C6orf62Q9GZU0 229 aaPredicted RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 OR51E2Q9H255 320 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 TMEM184CQ9NVA4 438 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 MS4A12Q9NXJ0 267 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 MRPL39Q9NYK5 338 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 GPR83Q9NYM4 423 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 LSM7Q9UK45 103 aaKnown RBP5.89□□□□□ -1.47
VCAM1-201ENST00000294728 RAB23Q9ULC3 237 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 DUSP12Q9UNI6 340 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 BTBD3Q9Y2F9 522 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 YIPF1Q9Y548 306 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 ASB4Q9Y574 426 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 DOCK6Q96HP0 2047 aa5.89□□□□□ -1.47
VCAM1-201ENST00000294728 TMEM129A0AVI4 362 aa5.88□□□□□ -1.47
VCAM1-201ENST00000294728 MGAT4DA6NG13 374 aa5.88□□□□□ -1.47
VCAM1-201ENST00000294728 MAN1A2O60476 641 aa5.88□□□□□ -1.47
VCAM1-201ENST00000294728 TPST2O60704 377 aa5.88□□□□□ -1.47
VCAM1-201ENST00000294728 VIPP01282 170 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms