RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SGCBQ16585 318 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 FLYWCH1Q4VC44 716 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 OR52E8Q6IFG1 317 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 TRIM74Q86UV6 250 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 OR2T33Q8NG76 320 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 RAB8BQ92930 207 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 NXPE2Q96DL1 559 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 S100A16Q96FQ6 103 aaKnown RBP12.28□□□□□ -0.44
PTCD1-201ENST00000292478 CITED4Q96RK1 184 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 DHRS4Q9BTZ2 278 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 B3GNT4Q9C0J1 378 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 PTGES2Q9H7Z7 377 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 EIF3KQ9UBQ5 218 aaKnown RBP12.28□□□□□ -0.44
PTCD1-201ENST00000292478 FBXO9Q9UK97 447 aaPredicted RBP12.28□□□□□ -0.44
PTCD1-201ENST00000292478 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 SH3PXD2BA1X283 911 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 DRGXA6NNA5 263 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 RNGTTO60942 597 aaKnown RBP12.28□□□□□ -0.44
PTCD1-201ENST00000292478 CH25HO95992 272 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 SCRN3Q0VDG4 424 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 MADCAM1Q13477 382 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 ARFRP1Q13795 201 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 ABCA11PQ4W5N1 156 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 TCEAL8Q8IYN2 117 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 UBE2J2Q8N2K1 259 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 RBP7Q96R05 134 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 RMI1Q9H9A7 625 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 KLF8O95600 359 aaPredicted RBP12.28□□□□□ -0.44
PTCD1-201ENST00000292478 IFNA7P01567 189 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 APOC1P02654 83 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 PGAM2P15259 253 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF41P51814 821 aaPredicted RBP12.28□□□□□ -0.44
PTCD1-201ENST00000292478 MEF2AQ02078 507 aaPredicted RBP12.28□□□□□ -0.44
PTCD1-201ENST00000292478 ALG1LQ6GMV1 187 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 GRHL2Q6ISB3 625 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 LRRC25Q8N386 305 aaPredicted RBP12.28□□□□□ -0.44
PTCD1-201ENST00000292478 SMPDL3BQ92485 455 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 GNG8Q9UK08 70 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 UNC119BA6NIH7 251 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 PROM1O43490 865 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 C5AR1P21730 350 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 CDKN1CP49918 316 aaPredicted RBP12.27□□□□□ -0.44
PTCD1-201ENST00000292478 SH3BP2P78314 561 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 ST3GAL4Q11206 333 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 EXOC3L2Q2M3D2 409 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 UGT3A2Q3SY77 523 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 KDELC1Q6UW63 502 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF440Q8IYI8 595 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 CCDC116Q8IYX3 515 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 OR10Q1Q8NGQ4 319 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 HERPUD2Q9BSE4 406 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 KLHL42Q9P2K6 505 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 BAIAP2Q9UQB8 552 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 HYKKA2RU49 373 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 FAM221BA6H8Z2 402 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 CFIP05156 583 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 DBIP07108 87 aaKnown RBP12.27□□□□□ -0.44
PTCD1-201ENST00000292478 BMP2P12643 396 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 GPR143P51810 404 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 CRISP1P54107 249 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 SLAMF1Q13291 335 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 RAB39AQ14964 217 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 GFOD2Q3B7J2 385 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 C4orf46Q504U0 113 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 RTL10Q7L3V2 364 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 SLC22A16Q86VW1 577 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 OR4C15Q8NGM1 316 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 MYRFLQ96LU7 910 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 TM9SF2Q99805 663 aa12.27□□□□□ -0.44
PTCD1-201ENST00000292478 TTC34A8MYJ7 566 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 CTSAP10619 480 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 ETV4P43268 484 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 OR4C11Q6IEV9 310 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 BAIAP2L2Q6UXY1 529 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 THEM6Q8WUY1 208 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 CMKLR1Q99788 373 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 ORAI3Q9BRQ5 295 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 ISPDA4D126 451 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 FLRT2O43155 660 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 OXTRP30559 389 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 MAB21L1Q13394 359 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF267Q14586 743 aaPredicted RBP12.27□□□□□ -0.45
PTCD1-201ENST00000292478 SLC39A5Q6ZMH5 540 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 C6orf120Q7Z4R8 191 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 PAQR7Q86WK9 346 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 APCDD1Q8J025 514 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 OR52N2Q8NGI0 321 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 SHKBP1Q8TBC3 707 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF778Q96MU6 729 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 BIRC8Q96P09 236 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 BCL7BQ9BQE9 202 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 METTL7AQ9H8H3 244 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 RDH14Q9HBH5 336 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 TMEM184CQ9NVA4 438 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 RHCGQ9UBD6 479 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 LAMP5Q9UJQ1 280 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 MYADML2A6NDP7 307 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 RPP14O95059 124 aaKnown RBP12.27□□□□□ -0.45
PTCD1-201ENST00000292478 PAK4O96013 591 aaPredicted RBP12.27□□□□□ -0.45
PTCD1-201ENST00000292478 STATHP02808 62 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms